Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP1P11387 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP1P11387 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOP1P11387 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TOP1P11387 AL049737.1-201ENST00000413920 1403 ntBASIC4.22□□□□□ -1.73
TOP1P11387 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 AC090337.1-201ENST00000579651 2074 ntBASIC4.22□□□□□ -1.73
TOP1P11387 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TOP1P11387 AL391417.1-201ENST00000404100 426 ntBASIC4.22□□□□□ -1.73
TOP1P11387 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP1P11387 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.22□□□□□ -1.73
TOP1P11387 RFESDP1-201ENST00000422350 461 ntBASIC4.22□□□□□ -1.73
TOP1P11387 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP1P11387 RNU6-775P-201ENST00000459318 96 ntBASIC4.22□□□□□ -1.73
TOP1P11387 RPL7L1P8-201ENST00000469911 741 ntBASIC4.22□□□□□ -1.73
TOP1P11387 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP1P11387 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.22□□□□□ -1.73
TOP1P11387 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP1P11387 OR8I1P-201ENST00000529291 931 ntBASIC4.22□□□□□ -1.73
TOP1P11387 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.22□□□□□ -1.73
TOP1P11387 AC006946.3-201ENST00000609791 756 ntBASIC4.22□□□□□ -1.73
TOP1P11387 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.22□□□□□ -1.73
TOP1P11387 AP004607.9-201ENST00000618202 316 ntBASIC4.22□□□□□ -1.73
TOP1P11387 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 AC007342.9-201ENST00000623877 1385 ntBASIC4.22□□□□□ -1.73
TOP1P11387 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TOP1P11387 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TOP1P11387 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
TOP1P11387 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TOP1P11387 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TOP1P11387 SDCBPP2-201ENST00000424643 885 ntBASIC4.21□□□□□ -1.74
TOP1P11387 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 RPL21P23-201ENST00000446654 460 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AP002345.1-201ENST00000456493 928 ntBASIC4.21□□□□□ -1.74
TOP1P11387 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP1P11387 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP1P11387 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 AC078817.1-201ENST00000492623 435 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC110768.1-201ENST00000509222 400 ntBASIC4.21□□□□□ -1.74
TOP1P11387 IGKV2D-23-201ENST00000518179 286 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP1P11387 OR5B10P-201ENST00000532869 642 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.21□□□□□ -1.74
TOP1P11387 AC074050.1-201ENST00000563247 211 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP1P11387 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
TOP1P11387 AC006116.10-201ENST00000591836 581 ntBASIC4.21□□□□□ -1.74
TOP1P11387 BNIP3P33-201ENST00000598912 569 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 U3.45-201ENST00000607547 219 ntBASIC4.21□□□□□ -1.74
TOP1P11387 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 AC107308.1-201ENST00000615897 301 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC243312.2-201ENST00000623340 601 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AC138649.5-201ENST00000637456 137 ntBASIC4.21□□□□□ -1.74
TOP1P11387 AL732372.2-225ENST00000642124 456 ntBASIC4.21□□□□□ -1.74
TOP1P11387 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP1P11387 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TOP1P11387 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TOP1P11387 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.2□□□□□ -1.74
TOP1P11387 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TOP1P11387 MIR218-2-201ENST00000385006 110 ntBASIC4.2□□□□□ -1.74
TOP1P11387 RPS3AP25-201ENST00000411660 793 ntBASIC4.2□□□□□ -1.74
TOP1P11387 RPL30P2-201ENST00000414021 291 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AC234782.4-201ENST00000417646 1048 ntBASIC4.2□□□□□ -1.74
TOP1P11387 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.2□□□□□ -1.74
TOP1P11387 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.2□□□□□ -1.74
TOP1P11387 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.2□□□□□ -1.74
TOP1P11387 ARL5AP2-201ENST00000444698 533 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.2□□□□□ -1.74
TOP1P11387 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.2□□□□□ -1.74
TOP1P11387 HMGB1P5-202ENST00000451497 985 ntBASIC4.2□□□□□ -1.74
TOP1P11387 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TOP1P11387 AC107398.1-201ENST00000486904 505 ntBASIC4.2□□□□□ -1.74
TOP1P11387 RPL5P23-201ENST00000496040 868 ntBASIC4.2□□□□□ -1.74
TOP1P11387 HMGB1P3-201ENST00000502802 616 ntBASIC4.2□□□□□ -1.74
TOP1P11387 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.2□□□□□ -1.74
TOP1P11387 AC090071.1-201ENST00000507713 644 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AC093770.1-201ENST00000511559 571 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.2□□□□□ -1.74
TOP1P11387 SNORA70.18-201ENST00000516696 98 ntBASIC4.2□□□□□ -1.74
TOP1P11387 RN7SKP234-201ENST00000517173 224 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.2□□□□□ -1.74
TOP1P11387 AL121594.4-201ENST00000556211 1196 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AL109741.3-201ENST00000561748 592 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AP000919.1-202ENST00000581139 1264 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AC006077.1-201ENST00000604746 343 ntBASIC4.2□□□□□ -1.74
TOP1P11387 AL034351.1-201ENST00000605288 668 ntBASIC4.2□□□□□ -1.74
TOP1P11387 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.2□□□□□ -1.74
TOP1P11387 AC092354.2-201ENST00000607786 514 ntBASIC4.2□□□□□ -1.74
TOP1P11387 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.2□□□□□ -1.74
TOP1P11387 AL391261.4-201ENST00000616012 481 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms