Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.81□□□□□ -1.8
RETP07949 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RETP07949 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.81□□□□□ -1.8
RETP07949 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RETP07949 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.81□□□□□ -1.8
RETP07949 MTCO2P22-201ENST00000603246 681 ntBASIC3.81□□□□□ -1.8
RETP07949 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.81□□□□□ -1.8
RETP07949 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.81□□□□□ -1.8
RETP07949 AC123768.4-201ENST00000616244 701 ntBASIC3.81□□□□□ -1.8
RETP07949 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RETP07949 U6.98-201ENST00000637157 84 ntBASIC3.81□□□□□ -1.8
RETP07949 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RETP07949 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.81□□□□□ -1.8
RETP07949 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
RETP07949 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RETP07949 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
RETP07949 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.8□□□□□ -1.8
RETP07949 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.8□□□□□ -1.8
RETP07949 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 RNU6-819P-201ENST00000364116 107 ntBASIC3.8□□□□□ -1.8
RETP07949 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RETP07949 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
RETP07949 RN7SKP222-201ENST00000410651 315 ntBASIC3.8□□□□□ -1.8
RETP07949 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 AL390879.2-203ENST00000426943 1121 ntBASIC3.8□□□□□ -1.8
RETP07949 ARF4P2-201ENST00000430209 526 ntBASIC3.8□□□□□ -1.8
RETP07949 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.8□□□□□ -1.8
RETP07949 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
RETP07949 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.8□□□□□ -1.8
RETP07949 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 VN1R48P-201ENST00000448149 1036 ntBASIC3.8□□□□□ -1.8
RETP07949 AC115115.1-201ENST00000449927 248 ntBASIC3.8□□□□□ -1.8
RETP07949 AC073387.1-201ENST00000453261 709 ntBASIC3.8□□□□□ -1.8
RETP07949 HMGB3P30-201ENST00000457863 606 ntBASIC3.8□□□□□ -1.8
RETP07949 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
RETP07949 PCNAP1-201ENST00000505363 709 ntBASIC3.8□□□□□ -1.8
RETP07949 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 MTCO1P30-201ENST00000515244 580 ntBASIC3.8□□□□□ -1.8
RETP07949 AC087369.1-201ENST00000520775 996 ntBASIC3.8□□□□□ -1.8
RETP07949 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
RETP07949 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
RETP07949 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
RETP07949 AC022387.2-201ENST00000604050 448 ntBASIC3.8□□□□□ -1.8
RETP07949 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.8□□□□□ -1.8
RETP07949 AC020658.4-201ENST00000613987 684 ntBASIC3.8□□□□□ -1.8
RETP07949 MIR6852-201ENST00000621699 66 ntBASIC3.8□□□□□ -1.8
RETP07949 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.8□□□□□ -1.8
RETP07949 AC138649.5-201ENST00000637456 137 ntBASIC3.8□□□□□ -1.8
RETP07949 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RETP07949 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 SAGE2P-201ENST00000420011 2126 ntBASIC3.8□□□□□ -1.8
RETP07949 SPATA2P1-201ENST00000431223 2055 ntBASIC3.8□□□□□ -1.8
RETP07949 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.8□□□□□ -1.8
RETP07949 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
RETP07949 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RETP07949 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
RETP07949 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RETP07949 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RETP07949 AC119744.1-201ENST00000454746 1715 ntBASIC3.79□□□□□ -1.8
RETP07949 SNORA38.1-201ENST00000364172 131 ntBASIC3.79□□□□□ -1.8
RETP07949 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RETP07949 MIR490-201ENST00000384865 128 ntBASIC3.79□□□□□ -1.8
RETP07949 AL122016.1-201ENST00000403365 367 ntBASIC3.79□□□□□ -1.8
RETP07949 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.79□□□□□ -1.8
RETP07949 RNF19BPX-201ENST00000426224 625 ntBASIC3.79□□□□□ -1.8
RETP07949 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RETP07949 AL365396.1-201ENST00000430854 671 ntBASIC3.79□□□□□ -1.8
RETP07949 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.79□□□□□ -1.8
RETP07949 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.79□□□□□ -1.8
RETP07949 SETD6P1-201ENST00000444575 317 ntBASIC3.79□□□□□ -1.8
RETP07949 AC026784.1-201ENST00000507986 352 ntBASIC3.79□□□□□ -1.8
RETP07949 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.79□□□□□ -1.8
RETP07949 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.79□□□□□ -1.8
RETP07949 AC034244.2-201ENST00000514668 858 ntBASIC3.79□□□□□ -1.8
RETP07949 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
RETP07949 OR4V1P-201ENST00000525394 1140 ntBASIC3.79□□□□□ -1.8
RETP07949 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RETP07949 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.79□□□□□ -1.8
RETP07949 NCAPGP2-201ENST00000557911 754 ntBASIC3.79□□□□□ -1.8
RETP07949 AC020914.6-201ENST00000594327 272 ntBASIC3.79□□□□□ -1.8
RETP07949 EIF1P6-201ENST00000600054 334 ntBASIC3.79□□□□□ -1.8
RETP07949 AC010591.1-201ENST00000603941 649 ntBASIC3.79□□□□□ -1.8
RETP07949 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.79□□□□□ -1.8
RETP07949 AC005021.1-201ENST00000608730 355 ntBASIC3.79□□□□□ -1.8
RETP07949 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
RETP07949 AC145207.9-201ENST00000623802 325 ntBASIC3.79□□□□□ -1.8
RETP07949 AC019080.5-201ENST00000624891 757 ntBASIC3.79□□□□□ -1.8
RETP07949 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.79□□□□□ -1.8
RETP07949 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.79□□□□□ -1.8
RETP07949 AC244205.2-202ENST00000635781 342 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms