Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNA5SP217-201ENST00000515959 91 ntBASIC2.82□□□□□ -1.96
CTSDP07339 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.82□□□□□ -1.96
CTSDP07339 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.82□□□□□ -1.96
CTSDP07339 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CTSDP07339 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.82□□□□□ -1.96
CTSDP07339 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.82□□□□□ -1.96
CTSDP07339 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.82□□□□□ -1.96
CTSDP07339 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.82□□□□□ -1.96
CTSDP07339 AC106785.1-201ENST00000565935 262 ntBASIC2.82□□□□□ -1.96
CTSDP07339 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.82□□□□□ -1.96
CTSDP07339 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.82□□□□□ -1.96
CTSDP07339 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.82□□□□□ -1.96
CTSDP07339 AC067852.3-201ENST00000589177 561 ntBASIC2.82□□□□□ -1.96
CTSDP07339 PSMA6P4-201ENST00000603247 718 ntBASIC2.82□□□□□ -1.96
CTSDP07339 AL451086.1-201ENST00000605596 223 ntBASIC2.82□□□□□ -1.96
CTSDP07339 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CTSDP07339 U4.6-201ENST00000621618 127 ntBASIC2.82□□□□□ -1.96
CTSDP07339 AC048347.1-201ENST00000624621 427 ntBASIC2.82□□□□□ -1.96
CTSDP07339 MIR4278-201ENST00000636094 69 ntBASIC2.82□□□□□ -1.96
CTSDP07339 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 MIR124-3-201ENST00000384866 87 ntBASIC2.81□□□□□ -1.96
CTSDP07339 FABP12P1-201ENST00000401911 322 ntBASIC2.81□□□□□ -1.96
CTSDP07339 RPL32P35-201ENST00000415214 394 ntBASIC2.81□□□□□ -1.96
CTSDP07339 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.81□□□□□ -1.96
CTSDP07339 AC012065.2-201ENST00000421295 375 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.81□□□□□ -1.96
CTSDP07339 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.81□□□□□ -1.96
CTSDP07339 ETF1P3-201ENST00000430422 1160 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.81□□□□□ -1.96
CTSDP07339 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AC093716.1-201ENST00000435923 377 ntBASIC2.81□□□□□ -1.96
CTSDP07339 CBX1P4-201ENST00000439415 457 ntBASIC2.81□□□□□ -1.96
CTSDP07339 Z99127.3-201ENST00000448158 395 ntBASIC2.81□□□□□ -1.96
CTSDP07339 SNORD108-201ENST00000459332 71 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AC007688.1-201ENST00000475592 759 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AC108471.1-201ENST00000513977 287 ntBASIC2.81□□□□□ -1.96
CTSDP07339 RNU1-143P-201ENST00000516296 146 ntBASIC2.81□□□□□ -1.96
CTSDP07339 RNA5SP380-201ENST00000517190 98 ntBASIC2.81□□□□□ -1.96
CTSDP07339 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.81□□□□□ -1.96
CTSDP07339 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AL161713.1-201ENST00000555538 145 ntBASIC2.81□□□□□ -1.96
CTSDP07339 BNIP3P5-201ENST00000562290 498 ntBASIC2.81□□□□□ -1.96
CTSDP07339 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.81□□□□□ -1.96
CTSDP07339 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.81□□□□□ -1.96
CTSDP07339 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.81□□□□□ -1.96
CTSDP07339 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.81□□□□□ -1.96
CTSDP07339 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.81□□□□□ -1.96
CTSDP07339 AC006557.5-201ENST00000603126 811 ntBASIC2.81□□□□□ -1.96
CTSDP07339 U1.23-201ENST00000610293 146 ntBASIC2.81□□□□□ -1.96
CTSDP07339 RNU1-68P-201ENST00000615382 146 ntBASIC2.81□□□□□ -1.96
CTSDP07339 U1.39-201ENST00000621562 146 ntBASIC2.81□□□□□ -1.96
CTSDP07339 AC145207.9-201ENST00000623802 325 ntBASIC2.81□□□□□ -1.96
CTSDP07339 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.81□□□□□ -1.96
CTSDP07339 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.81□□□□□ -1.96
CTSDP07339 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
CTSDP07339 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTSDP07339 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTSDP07339 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.8□□□□□ -1.96
CTSDP07339 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.8□□□□□ -1.96
CTSDP07339 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CTSDP07339 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTSDP07339 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTSDP07339 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTSDP07339 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 SNORA70E-201ENST00000384492 135 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AL445189.1-201ENST00000405722 338 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AL356967.1-201ENST00000406305 431 ntBASIC2.8□□□□□ -1.96
CTSDP07339 RN7SKP202-201ENST00000410439 330 ntBASIC2.8□□□□□ -1.96
CTSDP07339 RNA5SP44-201ENST00000410446 133 ntBASIC2.8□□□□□ -1.96
CTSDP07339 MTCYBP7-201ENST00000419540 1134 ntBASIC2.8□□□□□ -1.96
CTSDP07339 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CTSDP07339 AC092017.2-201ENST00000427600 362 ntBASIC2.8□□□□□ -1.96
CTSDP07339 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 RPL7P5-201ENST00000471472 736 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 AC093278.1-201ENST00000494700 600 ntBASIC2.8□□□□□ -1.96
CTSDP07339 OR5H3P-201ENST00000502817 919 ntBASIC2.8□□□□□ -1.96
CTSDP07339 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 HMGN1P11-201ENST00000508668 303 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AC108043.1-201ENST00000512696 574 ntBASIC2.8□□□□□ -1.96
CTSDP07339 RNU2-58P-201ENST00000516403 183 ntBASIC2.8□□□□□ -1.96
CTSDP07339 SCARNA20.6-201ENST00000517251 106 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.8□□□□□ -1.96
CTSDP07339 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 OR4T1P-201ENST00000554933 911 ntBASIC2.8□□□□□ -1.96
CTSDP07339 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.8□□□□□ -1.96
CTSDP07339 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 AC010680.4-201ENST00000605334 543 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AL365400.2-201ENST00000605604 902 ntBASIC2.8□□□□□ -1.96
CTSDP07339 AC012557.1-201ENST00000607115 611 ntBASIC2.8□□□□□ -1.96
CTSDP07339 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms