Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 CASC19-222ENST00000641321 1173 ntBASIC4.23□□□□□ -1.73
HLA-DQA2P01906 PABPC1P9-201ENST00000426076 1612 ntBASIC4.23□□□□□ -1.73
HLA-DQA2P01906 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 HSPA8P18-201ENST00000439846 1928 ntBASIC4.23□□□□□ -1.73
HLA-DQA2P01906 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA2P01906 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RNU4-21P-201ENST00000362802 126 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RNU4-24P-201ENST00000364565 139 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 SSXP10-201ENST00000402595 565 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 VN1R8P-201ENST00000407739 893 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 OR8G2P-201ENST00000412796 908 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RPL23AP39-201ENST00000415533 405 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 CHEK2P3-201ENST00000416118 248 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 Z99497.1-201ENST00000421282 135 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC093414.1-201ENST00000434712 514 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RPL7P11-201ENST00000437586 658 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 MTND4P6-201ENST00000438297 472 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AL512286.1-201ENST00000439244 400 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 UBE2V1P3-201ENST00000439651 417 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 TRIM60P18-201ENST00000441518 828 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 VN1R32P-201ENST00000452234 905 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 USP9YP10-201ENST00000454868 628 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RPS20P21-201ENST00000466859 343 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RPSAP50-201ENST00000481955 852 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC109486.1-201ENST00000486833 374 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC006499.3-201ENST00000506077 748 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC010424.1-201ENST00000506336 297 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 USP9YP5-201ENST00000511770 630 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RNU1-6P-201ENST00000516290 144 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC024909.2-201ENST00000553035 286 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 FKBP1BP1-201ENST00000553366 325 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC012414.6-201ENST00000568241 401 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 RSL24D1P11-201ENST00000591045 491 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC092354.1-201ENST00000606057 376 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC007497.1-201ENST00000610421 561 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 FAM27B-201ENST00000610601 213 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 MIR7844-201ENST00000616161 122 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AC091905.4-201ENST00000623432 202 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AP002799.1-201ENST00000623552 423 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AL031985.3-201ENST00000565390 2449 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 C4BPAP1-201ENST00000415474 1893 ntBASIC4.22□□□□□ -1.73
HLA-DQA2P01906 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DQA2P01906 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.21□□□□□ -1.73
HLA-DQA2P01906 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-DQA2P01906 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.21□□□□□ -1.73
HLA-DQA2P01906 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-DQA2P01906 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DQA2P01906 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA2P01906 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA2P01906 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms