Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNORA48.2-201ENST00000390926 124 ntBASIC3.22□□□□□ -1.89
TNFP01375 AL034403.1-201ENST00000399414 885 ntBASIC3.22□□□□□ -1.89
TNFP01375 AL136131.1-201ENST00000406079 803 ntBASIC3.22□□□□□ -1.89
TNFP01375 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TNFP01375 AC009263.1-201ENST00000441193 1239 ntBASIC3.22□□□□□ -1.89
TNFP01375 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFP01375 ATP5C1P1-201ENST00000441945 895 ntBASIC3.22□□□□□ -1.89
TNFP01375 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFP01375 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TNFP01375 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
TNFP01375 RPS29P2-201ENST00000479278 136 ntBASIC3.22□□□□□ -1.89
TNFP01375 RPS3AP43-201ENST00000479743 781 ntBASIC3.22□□□□□ -1.89
TNFP01375 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
TNFP01375 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.22□□□□□ -1.89
TNFP01375 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFP01375 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFP01375 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFP01375 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFP01375 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFP01375 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFP01375 BNIP3P19-201ENST00000605397 577 ntBASIC3.22□□□□□ -1.89
TNFP01375 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFP01375 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
TNFP01375 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFP01375 AC009452.1-201ENST00000640823 606 ntBASIC3.22□□□□□ -1.89
TNFP01375 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TNFP01375 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFP01375 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFP01375 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
TNFP01375 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
TNFP01375 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFP01375 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFP01375 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 RPL23AP82-202ENST00000427528 469 ntBASIC3.21□□□□□ -1.9
TNFP01375 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 AC115115.1-201ENST00000449927 248 ntBASIC3.21□□□□□ -1.9
TNFP01375 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.21□□□□□ -1.9
TNFP01375 CENPBD1P1-201ENST00000464061 469 ntBASIC3.21□□□□□ -1.9
TNFP01375 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFP01375 AC020893.1-201ENST00000502452 580 ntBASIC3.21□□□□□ -1.9
TNFP01375 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFP01375 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFP01375 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFP01375 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.21□□□□□ -1.9
TNFP01375 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFP01375 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.21□□□□□ -1.9
TNFP01375 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TNFP01375 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
TNFP01375 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFP01375 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 RNA5SP374-201ENST00000362939 125 ntBASIC3.2□□□□□ -1.9
TNFP01375 AL159169.1-201ENST00000421119 127 ntBASIC3.2□□□□□ -1.9
TNFP01375 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFP01375 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFP01375 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFP01375 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFP01375 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFP01375 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.2□□□□□ -1.9
TNFP01375 AC006518.1-201ENST00000541449 943 ntBASIC3.2□□□□□ -1.9
TNFP01375 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.2□□□□□ -1.9
TNFP01375 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFP01375 AC125494.3-201ENST00000602759 455 ntBASIC3.2□□□□□ -1.9
TNFP01375 Z82195.1-201ENST00000604558 398 ntBASIC3.2□□□□□ -1.9
TNFP01375 AL713922.2-201ENST00000619384 716 ntBASIC3.2□□□□□ -1.9
TNFP01375 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFP01375 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TNFP01375 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFP01375 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFP01375 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFP01375 BX005019.1-201ENST00000561881 1810 ntBASIC3.19□□□□□ -1.9
TNFP01375 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFP01375 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFP01375 GNG5P1-201ENST00000255500 204 ntBASIC3.19□□□□□ -1.9
TNFP01375 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
TNFP01375 MIR128-1-201ENST00000384921 82 ntBASIC3.19□□□□□ -1.9
TNFP01375 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
TNFP01375 AC007899.1-201ENST00000412776 775 ntBASIC3.19□□□□□ -1.9
TNFP01375 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFP01375 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.19□□□□□ -1.9
TNFP01375 METTL15P1-201ENST00000481421 1045 ntBASIC3.19□□□□□ -1.9
TNFP01375 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms