Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL159987.1-201ENST00000347911 293 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 Y_RNA.1-201ENST00000352915 104 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 RNU6-1085P-201ENST00000363576 107 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 Y_RNA.279-201ENST00000364763 95 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 RNU6-809P-201ENST00000384461 107 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 RNU6-692P-201ENST00000384496 107 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 SDCBPP3-201ENST00000419629 891 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 RPL38P1-201ENST00000460914 211 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 RPS23P6-201ENST00000466136 431 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AL133445.1-201ENST00000467051 452 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 RPS23P1-201ENST00000491662 432 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 MTCO3P9-201ENST00000506989 781 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 SOD1P3-201ENST00000518682 454 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 AP006245.2-201ENST00000522004 300 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 MRPS16P1-201ENST00000523462 412 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 AL512360.1-201ENST00000555346 234 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AL161713.1-201ENST00000555538 145 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AL049872.1-201ENST00000556323 322 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AC044860.2-201ENST00000561005 179 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC025678.1-201ENST00000567861 338 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.04□□□□□ -1.6
CNOT4O95628 AL513327.3-201ENST00000602618 469 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AC025857.2-201ENST00000602711 238 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AL133481.2-203ENST00000607558 139 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 CU639417.4-201ENST00000623928 207 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 AC026634.1-201ENST00000634369 198 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AC110994.2-201ENST00000635481 492 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT4O95628 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CNOT4O95628 SNORA64.1-201ENST00000362600 132 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 RNA5SP131-201ENST00000365452 119 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 RNA5SP30-201ENST00000365552 115 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 Y_RNA.409-201ENST00000383990 98 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CNOT4O95628 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT4O95628 SPTLC1P2-201ENST00000407089 121 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 VN1R8P-201ENST00000407739 893 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 ZNF90P2-204ENST00000419323 1075 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AF228730.4-201ENST00000421457 183 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT4O95628 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC109583.1-201ENST00000432156 268 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 AC009961.2-201ENST00000435771 251 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 KRT8P51-201ENST00000438938 274 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 SPRYD7P1-201ENST00000443861 570 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 RAD23BP3-201ENST00000454157 1152 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT4O95628 RPL32P33-201ENST00000487023 394 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 RN7SL591P-201ENST00000496150 292 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 HMGB1P21-201ENST00000502313 581 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT4O95628 AC117522.3-201ENST00000507974 584 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CNOT4O95628 Y_RNA.675-201ENST00000516389 149 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 Y_RNA.693-201ENST00000516641 110 ntBASIC5.03□□□□□ -1.6
CNOT4O95628 SNORA43.3-201ENST00000517240 103 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms