Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.85□□□□□ -1.63
MBD4O95243 NPM1P13-201ENST00000452663 865 ntBASIC4.85□□□□□ -1.63
MBD4O95243 MRPL42P4-201ENST00000453267 443 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.85□□□□□ -1.63
MBD4O95243 NF1P3-201ENST00000457709 450 ntBASIC4.85□□□□□ -1.63
MBD4O95243 snoU109.3-201ENST00000459477 145 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC006517.1-201ENST00000480485 328 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC079203.1-201ENST00000487972 404 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC018797.3-201ENST00000513388 1241 ntBASIC4.85□□□□□ -1.63
MBD4O95243 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.85□□□□□ -1.63
MBD4O95243 OR4C2P-201ENST00000530855 1064 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.85□□□□□ -1.63
MBD4O95243 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.85□□□□□ -1.63
MBD4O95243 AC007599.1-201ENST00000568688 1174 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC079171.1-201ENST00000568788 914 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC074051.3-201ENST00000570238 358 ntBASIC4.85□□□□□ -1.63
MBD4O95243 MTND6P33-201ENST00000571794 183 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
MBD4O95243 AC096947.1-201ENST00000603233 470 ntBASIC4.85□□□□□ -1.63
MBD4O95243 LLPHP1-201ENST00000603571 367 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC084824.4-201ENST00000620106 731 ntBASIC4.85□□□□□ -1.63
MBD4O95243 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
MBD4O95243 AC055839.1-201ENST00000634467 498 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AC087821.2-201ENST00000637086 450 ntBASIC4.85□□□□□ -1.63
MBD4O95243 AL122126.1-201ENST00000546905 1318 ntBASIC4.85□□□□□ -1.63
MBD4O95243 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
MBD4O95243 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.85□□□□□ -1.63
MBD4O95243 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.85□□□□□ -1.63
MBD4O95243 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MBD4O95243 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
MBD4O95243 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MBD4O95243 FAM91A3P-201ENST00000456826 2544 ntBASIC4.84□□□□□ -1.63
MBD4O95243 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 MARK2P15-201ENST00000432204 2186 ntBASIC4.84□□□□□ -1.63
MBD4O95243 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MBD4O95243 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MBD4O95243 MTND5P31-201ENST00000419366 1374 ntBASIC4.84□□□□□ -1.63
MBD4O95243 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MBD4O95243 HMGB1P5-201ENST00000255320 642 ntBASIC4.84□□□□□ -1.63
MBD4O95243 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MBD4O95243 AL121978.1-201ENST00000402778 359 ntBASIC4.84□□□□□ -1.63
MBD4O95243 MTCO3P31-201ENST00000405526 789 ntBASIC4.84□□□□□ -1.63
MBD4O95243 ZNF603P-201ENST00000405613 487 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AL139098.1-201ENST00000407291 389 ntBASIC4.84□□□□□ -1.63
MBD4O95243 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MBD4O95243 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 RPP40P1-201ENST00000426762 456 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.84□□□□□ -1.63
MBD4O95243 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 FGF7P3-201ENST00000454645 303 ntBASIC4.84□□□□□ -1.63
MBD4O95243 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 VN1R105P-201ENST00000486595 910 ntBASIC4.84□□□□□ -1.63
MBD4O95243 PRELID3BP6-201ENST00000503839 571 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC011352.3-201ENST00000505162 593 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC096571.1-202ENST00000506634 735 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 AC109471.1-201ENST00000511631 612 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.84□□□□□ -1.63
MBD4O95243 RN7SL703P-201ENST00000578485 302 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.84□□□□□ -1.63
MBD4O95243 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.84□□□□□ -1.63
MBD4O95243 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC069431.2-201ENST00000604149 1099 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.84□□□□□ -1.63
MBD4O95243 AC024933.1-201ENST00000608472 348 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.84□□□□□ -1.63
MBD4O95243 MIR6500-201ENST00000622700 86 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC104985.3-201ENST00000623479 597 ntBASIC4.84□□□□□ -1.63
MBD4O95243 AC008785.1-201ENST00000624475 456 ntBASIC4.84□□□□□ -1.63
MBD4O95243 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
MBD4O95243 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.64
MBD4O95243 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.84□□□□□ -1.64
MBD4O95243 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
MBD4O95243 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
MBD4O95243 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
MBD4O95243 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MBD4O95243 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MBD4O95243 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.83□□□□□ -1.64
MBD4O95243 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MBD4O95243 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.83□□□□□ -1.64
MBD4O95243 RNU6-839P-201ENST00000363347 108 ntBASIC4.83□□□□□ -1.64
MBD4O95243 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
MBD4O95243 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
MBD4O95243 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.83□□□□□ -1.64
MBD4O95243 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms