Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AL356968.1-201ENST00000416622 474 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 CR848007.2-201ENST00000424918 787 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 OR2AS1P-201ENST00000427827 319 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 RPS29P17-201ENST00000430795 166 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AL691517.1-201ENST00000440833 1235 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 GAPDHP27-201ENST00000447427 1020 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AC010655.1-201ENST00000449336 292 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 MTND5P8-201ENST00000449817 1083 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 RPL23AP15-201ENST00000450202 459 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 RPL23AP23-201ENST00000452590 471 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1BO75841 AC091564.1-201ENST00000464563 479 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 GAPDHP36-201ENST00000480688 918 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 NCOR1P1-202ENST00000486162 291 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1BO75841 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1BO75841 AC008565.1-201ENST00000509046 885 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AC106872.4-201ENST00000510050 523 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1BO75841 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1BO75841 AC010306.1-201ENST00000523223 1117 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1BO75841 AP000619.3-201ENST00000535634 1127 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.06□□□□□ -1.92
UPK1BO75841 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.06□□□□□ -1.92
UPK1BO75841 AC074029.1-201ENST00000552531 1044 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AC073429.2-201ENST00000569694 1444 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 MIR3176-201ENST00000582210 90 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 AC010928.3-201ENST00000587712 541 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1BO75841 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 AP001148.1-201ENST00000624124 2359 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 MIR4302-201ENST00000638058 60 ntBASIC3.06□□□□□ -1.92
UPK1BO75841 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
UPK1BO75841 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
UPK1BO75841 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AL672296.1-201ENST00000427780 2158 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AL356274.2-201ENST00000624379 3752 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AC021755.1-201ENST00000559747 1447 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 OR5T3-201ENST00000303059 1023 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 RNA5SP97-201ENST00000365006 84 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.05□□□□□ -1.92
UPK1BO75841 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AL390879.2-203ENST00000426943 1121 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 UBE2V1P5-201ENST00000440070 405 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AC004865.1-201ENST00000442276 1003 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 CEACAMP7-201ENST00000444105 496 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AL590399.6-201ENST00000446396 307 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 AL513343.1-201ENST00000451818 792 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.05□□□□□ -1.92
UPK1BO75841 AC010618.1-201ENST00000469924 477 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.05□□□□□ -1.92
UPK1BO75841 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.05□□□□□ -1.92
UPK1BO75841 AC078918.1-201ENST00000498515 228 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 UBE2CP3-201ENST00000502715 450 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 RNA5SP217-201ENST00000515959 91 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 RN7SKP21-201ENST00000516503 220 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 AP004242.1-201ENST00000533701 349 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AP003717.3-201ENST00000544832 1180 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AC025918.2-201ENST00000558683 763 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.05□□□□□ -1.92
UPK1BO75841 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1BO75841 AC005229.3-201ENST00000603438 323 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 SUMO2P15-201ENST00000604285 278 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AC135178.6-201ENST00000605314 398 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 MIR6768-201ENST00000610734 72 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 AL356490.1-201ENST00000623079 479 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AC010608.2-201ENST00000624830 470 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.05□□□□□ -1.92
UPK1BO75841 MIR4278-201ENST00000636094 69 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AC083865.1-201ENST00000636634 831 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 AF001550.2-201ENST00000636643 217 ntBASIC3.05□□□□□ -1.92
UPK1BO75841 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1BO75841 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1BO75841 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1BO75841 AL157700.1-201ENST00000561973 1432 ntBASIC3.04□□□□□ -1.92
UPK1BO75841 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.04□□□□□ -1.92
UPK1BO75841 RNA5SP435-201ENST00000364044 108 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms