Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX3O60493 AC090877.1-201ENST00000561418 344 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX3O60493 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX3O60493 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 RN7SL690P-201ENST00000582087 240 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX3O60493 AL035411.2-201ENST00000604022 421 ntBASIC3.93□□□□□ -1.78
SNX3O60493 HSPE1P14-201ENST00000605812 302 ntBASIC3.93□□□□□ -1.78
SNX3O60493 MIR6862-1-201ENST00000613016 70 ntBASIC3.93□□□□□ -1.78
SNX3O60493 MIR6862-2-201ENST00000614755 70 ntBASIC3.93□□□□□ -1.78
SNX3O60493 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.93□□□□□ -1.78
SNX3O60493 AP000843.1-201ENST00000624880 701 ntBASIC3.93□□□□□ -1.78
SNX3O60493 LINC02211-204ENST00000642024 1070 ntBASIC3.93□□□□□ -1.78
SNX3O60493 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 AP005901.5-201ENST00000545779 1796 ntBASIC3.93□□□□□ -1.78
SNX3O60493 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SNX3O60493 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX3O60493 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SNX3O60493 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX3O60493 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX3O60493 MFSD8-216ENST00000641147 4009 ntBASIC3.92□□□□□ -1.78
SNX3O60493 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX3O60493 RNU6-906P-201ENST00000384700 70 ntBASIC3.92□□□□□ -1.78
SNX3O60493 SNORD65.1-201ENST00000390889 71 ntBASIC3.92□□□□□ -1.78
SNX3O60493 MIR298-201ENST00000401212 88 ntBASIC3.92□□□□□ -1.78
SNX3O60493 TMSB4XP8-201ENST00000402089 135 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AL136310.1-201ENST00000404926 654 ntBASIC3.92□□□□□ -1.78
SNX3O60493 RN7SKP213-201ENST00000410746 298 ntBASIC3.92□□□□□ -1.78
SNX3O60493 TMSB4XP6-201ENST00000415187 135 ntBASIC3.92□□□□□ -1.78
SNX3O60493 TMSB4XP1-201ENST00000424567 135 ntBASIC3.92□□□□□ -1.78
SNX3O60493 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
SNX3O60493 GTF2IP7-202ENST00000436677 309 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.92□□□□□ -1.78
SNX3O60493 RPS17P13-201ENST00000448974 407 ntBASIC3.92□□□□□ -1.78
SNX3O60493 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 FABP3P2-201ENST00000453169 399 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC087385.1-201ENST00000475062 312 ntBASIC3.92□□□□□ -1.78
SNX3O60493 RPL23AP44-201ENST00000482216 473 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC108729.1-201ENST00000487812 947 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.92□□□□□ -1.78
SNX3O60493 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX3O60493 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC105233.3-201ENST00000531125 744 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX3O60493 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX3O60493 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX3O60493 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX3O60493 AC084783.1-201ENST00000565846 910 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AGGF1P5-201ENST00000567900 919 ntBASIC3.92□□□□□ -1.78
SNX3O60493 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX3O60493 MIR4504-201ENST00000577413 92 ntBASIC3.92□□□□□ -1.78
SNX3O60493 MIR3912-201ENST00000577566 105 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC069366.1-201ENST00000583159 838 ntBASIC3.92□□□□□ -1.78
SNX3O60493 AC034229.4-201ENST00000607861 441 ntBASIC3.92□□□□□ -1.78
SNX3O60493 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 MIR6715B-201ENST00000637172 77 ntBASIC3.92□□□□□ -1.78
SNX3O60493 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SNX3O60493 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX3O60493 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX3O60493 RAD17P1-201ENST00000418130 2042 ntBASIC3.92□□□□□ -1.78
SNX3O60493 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX3O60493 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX3O60493 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 AC116667.1-201ENST00000604855 2072 ntBASIC3.91□□□□□ -1.78
SNX3O60493 MTND5P31-201ENST00000419366 1374 ntBASIC3.91□□□□□ -1.78
SNX3O60493 CR788268.1-201ENST00000603931 1809 ntBASIC3.91□□□□□ -1.78
SNX3O60493 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX3O60493 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 AP000568.1-201ENST00000282964 442 ntBASIC3.91□□□□□ -1.78
SNX3O60493 RNU4-68P-201ENST00000364314 141 ntBASIC3.91□□□□□ -1.78
SNX3O60493 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SNX3O60493 FABP12P1-201ENST00000401911 322 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AL133264.1-201ENST00000407157 562 ntBASIC3.91□□□□□ -1.78
SNX3O60493 NRBF2P2-201ENST00000413087 861 ntBASIC3.91□□□□□ -1.78
SNX3O60493 FCF1P2-201ENST00000415284 583 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX3O60493 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX3O60493 UBE2V1P1-201ENST00000430836 445 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX3O60493 MTND2P5-201ENST00000432656 1006 ntBASIC3.91□□□□□ -1.78
SNX3O60493 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX3O60493 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX3O60493 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC093155.1-201ENST00000440164 826 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 EEF1A1P39-201ENST00000440791 250 ntBASIC3.91□□□□□ -1.78
SNX3O60493 NDUFA5P7-201ENST00000452914 242 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms