Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RRP9O43818 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.84□□□□□ -1.63
RRP9O43818 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 Y_RNA.18-201ENST00000362461 102 ntBASIC4.84□□□□□ -1.63
RRP9O43818 Y_RNA.51-201ENST00000362725 102 ntBASIC4.84□□□□□ -1.63
RRP9O43818 RNA5SP500-201ENST00000364486 119 ntBASIC4.84□□□□□ -1.63
RRP9O43818 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RRP9O43818 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC008280.1-201ENST00000418851 412 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 SRSF1P1-201ENST00000424058 520 ntBASIC4.84□□□□□ -1.63
RRP9O43818 RPP40P1-201ENST00000426762 456 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC002069.1-201ENST00000429649 1159 ntBASIC4.84□□□□□ -1.63
RRP9O43818 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 ARF4P2-201ENST00000430209 526 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 RPL23AP25-201ENST00000430973 463 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 AL451139.1-201ENST00000434718 346 ntBASIC4.84□□□□□ -1.63
RRP9O43818 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 RPL23AP35-201ENST00000451906 501 ntBASIC4.84□□□□□ -1.63
RRP9O43818 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 VDAC2P4-201ENST00000452925 711 ntBASIC4.84□□□□□ -1.63
RRP9O43818 RPL23AP14-201ENST00000468281 468 ntBASIC4.84□□□□□ -1.63
RRP9O43818 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.84□□□□□ -1.63
RRP9O43818 AC112198.1-201ENST00000505369 1220 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC005798.1-201ENST00000513715 387 ntBASIC4.84□□□□□ -1.63
RRP9O43818 RNY4P37-201ENST00000516225 96 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 ARL2BPP5-201ENST00000523141 481 ntBASIC4.84□□□□□ -1.63
RRP9O43818 SMARCE1P4-201ENST00000523647 241 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.84□□□□□ -1.63
RRP9O43818 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 AC006512.2-201ENST00000543250 486 ntBASIC4.84□□□□□ -1.63
RRP9O43818 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 MIR4776-2-201ENST00000580204 80 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.84□□□□□ -1.63
RRP9O43818 AC103792.1-201ENST00000603591 919 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC020910.2-201ENST00000603635 610 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC073114.1-201ENST00000612027 490 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.84□□□□□ -1.63
RRP9O43818 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RRP9O43818 AC245014.3-201ENST00000618589 347 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC008443.7-201ENST00000622195 246 ntBASIC4.84□□□□□ -1.63
RRP9O43818 AC007546.2-201ENST00000623996 360 ntBASIC4.84□□□□□ -1.63
RRP9O43818 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RRP9O43818 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.84□□□□□ -1.64
RRP9O43818 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RRP9O43818 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RRP9O43818 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RRP9O43818 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RRP9O43818 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.84□□□□□ -1.64
RRP9O43818 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RRP9O43818 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.83□□□□□ -1.64
RRP9O43818 NCLP2-201ENST00000416078 1462 ntBASIC4.83□□□□□ -1.64
RRP9O43818 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RRP9O43818 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 COX6B1P3-201ENST00000312310 260 ntBASIC4.83□□□□□ -1.64
RRP9O43818 RNU6-216P-201ENST00000363282 104 ntBASIC4.83□□□□□ -1.64
RRP9O43818 RNU4-24P-201ENST00000364565 139 ntBASIC4.83□□□□□ -1.64
RRP9O43818 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RRP9O43818 ATP5F1P4-201ENST00000397288 746 ntBASIC4.83□□□□□ -1.64
RRP9O43818 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RRP9O43818 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.83□□□□□ -1.64
RRP9O43818 AL589647.1-201ENST00000402485 466 ntBASIC4.83□□□□□ -1.64
RRP9O43818 RNU6-920P-201ENST00000410926 92 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AC244035.1-201ENST00000430042 390 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AC126120.1-201ENST00000431082 470 ntBASIC4.83□□□□□ -1.64
RRP9O43818 MTCO2P16-201ENST00000436962 677 ntBASIC4.83□□□□□ -1.64
RRP9O43818 MTCYBP39-201ENST00000437562 491 ntBASIC4.83□□□□□ -1.64
RRP9O43818 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.83□□□□□ -1.64
RRP9O43818 AC083863.1-201ENST00000438811 231 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.83□□□□□ -1.64
RRP9O43818 HMGN3P1-201ENST00000453847 193 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AP000893.1-201ENST00000474462 794 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AC080014.1-201ENST00000496877 1201 ntBASIC4.83□□□□□ -1.64
RRP9O43818 KLRA1P-201ENST00000503499 986 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.83□□□□□ -1.64
RRP9O43818 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.83□□□□□ -1.64
RRP9O43818 HMGB1P28-201ENST00000507778 552 ntBASIC4.83□□□□□ -1.64
RRP9O43818 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms