Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MTND2P33-201ENST00000506452 1031 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.78□□□□□ -1.64
PROM1O43490 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.78□□□□□ -1.64
PROM1O43490 RN7SKP260-201ENST00000516907 149 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.78□□□□□ -1.64
PROM1O43490 AC025881.1-201ENST00000518851 512 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AP001922.4-201ENST00000526967 290 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AP002453.2-201ENST00000533503 320 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC137768.1-201ENST00000549998 553 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.78□□□□□ -1.64
PROM1O43490 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.78□□□□□ -1.64
PROM1O43490 HNRNPCP4-201ENST00000571636 900 ntBASIC4.78□□□□□ -1.64
PROM1O43490 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.78□□□□□ -1.64
PROM1O43490 AC006116.3-201ENST00000592968 361 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC020914.6-201ENST00000594327 272 ntBASIC4.78□□□□□ -1.64
PROM1O43490 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.78□□□□□ -1.64
PROM1O43490 AL109618.2-201ENST00000605527 211 ntBASIC4.78□□□□□ -1.64
PROM1O43490 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 AL513477.2-201ENST00000607858 568 ntBASIC4.78□□□□□ -1.64
PROM1O43490 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PROM1O43490 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PROM1O43490 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.78□□□□□ -1.64
PROM1O43490 AC119744.1-201ENST00000454746 1715 ntBASIC4.77□□□□□ -1.65
PROM1O43490 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 AC063976.2-201ENST00000425667 3556 ntBASIC4.77□□□□□ -1.65
PROM1O43490 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
PROM1O43490 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PROM1O43490 SUGT1P1-201ENST00000379514 476 ntBASIC4.77□□□□□ -1.65
PROM1O43490 SNORD116-23-201ENST00000384645 92 ntBASIC4.77□□□□□ -1.65
PROM1O43490 RPL23AP29-201ENST00000397284 453 ntBASIC4.77□□□□□ -1.65
PROM1O43490 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 MTCYBP36-201ENST00000404146 440 ntBASIC4.77□□□□□ -1.65
PROM1O43490 SNORA77-201ENST00000408716 125 ntBASIC4.77□□□□□ -1.65
PROM1O43490 RNU6-272P-201ENST00000411028 104 ntBASIC4.77□□□□□ -1.65
PROM1O43490 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AL136133.1-201ENST00000413694 376 ntBASIC4.77□□□□□ -1.65
PROM1O43490 RPL21P108-201ENST00000413857 481 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AC062016.2-201ENST00000420950 676 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 MTND1P28-201ENST00000435623 950 ntBASIC4.77□□□□□ -1.65
PROM1O43490 UBE2FP3-201ENST00000436366 524 ntBASIC4.77□□□□□ -1.65
PROM1O43490 GEMIN8P3-201ENST00000445417 720 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.77□□□□□ -1.65
PROM1O43490 AL354714.3-201ENST00000447284 493 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 AC108463.1-201ENST00000450258 347 ntBASIC4.77□□□□□ -1.65
PROM1O43490 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AP000942.1-201ENST00000463969 747 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL161747.1-201ENST00000480068 358 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC090013.1-201ENST00000485147 480 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 MTAPP1-201ENST00000489154 819 ntBASIC4.77□□□□□ -1.65
PROM1O43490 CEACAMP10-202ENST00000495431 496 ntBASIC4.77□□□□□ -1.65
PROM1O43490 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AC108078.3-201ENST00000502633 489 ntBASIC4.77□□□□□ -1.65
PROM1O43490 HMGB3P16-201ENST00000508037 287 ntBASIC4.77□□□□□ -1.65
PROM1O43490 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 RN7SKP46-201ENST00000515942 234 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.77□□□□□ -1.65
PROM1O43490 IGKV2-36-201ENST00000519999 223 ntBASIC4.77□□□□□ -1.65
PROM1O43490 COX6B1P6-201ENST00000522347 255 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.77□□□□□ -1.65
PROM1O43490 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 AC004217.3-201ENST00000551552 878 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.77□□□□□ -1.65
PROM1O43490 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PROM1O43490 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.77□□□□□ -1.65
PROM1O43490 MIR4480-201ENST00000582492 71 ntBASIC4.77□□□□□ -1.65
PROM1O43490 MIR4512-201ENST00000583257 77 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC012065.4-201ENST00000602445 679 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC105254.2-201ENST00000603636 436 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AL357078.3-201ENST00000607528 618 ntBASIC4.77□□□□□ -1.65
PROM1O43490 AC107214.2-201ENST00000608204 634 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms