Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-1226P-201ENST00000384317 107 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 MIR1250-201ENST00000408098 113 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 VDAC1P9-201ENST00000412766 841 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 OR8G2P-201ENST00000412796 908 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF3O43395 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF3O43395 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF3O43395 UQCRBP1-201ENST00000421129 336 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF3O43395 AC004448.2-201ENST00000422360 586 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF3O43395 RPL23AP74-201ENST00000437246 471 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AL138878.2-201ENST00000440581 1241 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF3O43395 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF3O43395 AC007686.1-201ENST00000488511 463 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 RPL23AP72-201ENST00000492447 435 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.23□□□□□ -1.57
PRPF3O43395 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF3O43395 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.23□□□□□ -1.57
PRPF3O43395 OR5AN2P-201ENST00000534535 896 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF3O43395 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF3O43395 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
PRPF3O43395 HSPE1P3-201ENST00000559254 309 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 MIR5186-201ENST00000577504 120 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AC069061.3-201ENST00000582254 823 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF3O43395 RPL7P50-201ENST00000600588 727 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 HSPE1P14-201ENST00000605812 302 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AP002360.3-201ENST00000607673 710 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AL133243.1-201ENST00000614487 366 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AC140113.4-201ENST00000622087 222 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AC009039.2-201ENST00000624524 529 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 AC012321.1-201ENST00000561622 1588 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PRPF3O43395 EOGT-210ENST00000615922 1931 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF3O43395 GDI2P1-201ENST00000429312 1336 ntBASIC5.23□□□□□ -1.57
PRPF3O43395 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 MAPK10-349ENST00000641767 3661 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PRPF3O43395 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF3O43395 RNU6-398P-201ENST00000384143 109 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 RNU6-253P-201ENST00000384730 105 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 ATP5F1P3-201ENST00000397213 657 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 AL024474.1-201ENST00000404655 591 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 USP9YP33-201ENST00000412220 421 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF3O43395 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF3O43395 MTCYBP38-201ENST00000417160 1123 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC073335.1-201ENST00000427776 363 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 USP9YP35-201ENST00000435696 412 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC012671.1-201ENST00000451912 203 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC092757.1-201ENST00000467293 467 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 RPS29P22-201ENST00000472363 168 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC008897.1-201ENST00000494006 347 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC105313.1-201ENST00000509121 353 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC026412.2-201ENST00000512270 1075 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF3O43395 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC084783.1-201ENST00000565846 910 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 MIR4637-201ENST00000582405 84 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC008782.1-201ENST00000603386 430 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 RNU6-88P-201ENST00000606801 100 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AC243773.3-201ENST00000613270 256 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.22□□□□□ -1.57
PRPF3O43395 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 OR56B2P-202ENST00000641377 2453 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 AC097504.1-201ENST00000515103 2415 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF3O43395 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.22□□□□□ -1.57
PRPF3O43395 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PRPF3O43395 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PRPF3O43395 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PRPF3O43395 AC139769.1-204ENST00000472297 1931 ntBASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms