Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC112206.3-201ENST00000514578 389 ntBASIC6□□□□□ -1.45
SOX1O00570 RNU6-488P-201ENST00000515918 99 ntBASIC6□□□□□ -1.45
SOX1O00570 RN7SKP98-201ENST00000517070 156 ntBASIC6□□□□□ -1.45
SOX1O00570 AC078899.1-201ENST00000521432 1185 ntBASIC6□□□□□ -1.45
SOX1O00570 AC107953.1-201ENST00000522216 297 ntBASIC6□□□□□ -1.45
SOX1O00570 COX6CP8-201ENST00000522620 226 ntBASIC6□□□□□ -1.45
SOX1O00570 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6□□□□□ -1.45
SOX1O00570 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6□□□□□ -1.45
SOX1O00570 HMGB1P6-201ENST00000569046 646 ntBASIC6□□□□□ -1.45
SOX1O00570 AC011447.4-201ENST00000587562 111 ntBASIC6□□□□□ -1.45
SOX1O00570 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6□□□□□ -1.45
SOX1O00570 AC010525.2-201ENST00000590920 195 ntBASIC6□□□□□ -1.45
SOX1O00570 AC008638.3-201ENST00000603341 463 ntBASIC6□□□□□ -1.45
SOX1O00570 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6□□□□□ -1.45
SOX1O00570 OR10AB1P-201ENST00000609613 938 ntBASIC6□□□□□ -1.45
SOX1O00570 AC104237.2-201ENST00000612456 443 ntBASIC6□□□□□ -1.45
SOX1O00570 AC008957.3-201ENST00000624112 2242 ntBASIC6□□□□□ -1.45
SOX1O00570 MTND4P35-201ENST00000604257 1375 ntBASIC6□□□□□ -1.45
SOX1O00570 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6□□□□□ -1.45
SOX1O00570 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX1O00570 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6□□□□□ -1.45
SOX1O00570 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6□□□□□ -1.45
SOX1O00570 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SOX1O00570 CASC19-204ENST00000641001 2055 ntBASIC6□□□□□ -1.45
SOX1O00570 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SOX1O00570 TNPO1P2-201ENST00000426249 2665 ntBASIC6□□□□□ -1.45
SOX1O00570 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 USP9YP4-201ENST00000424401 1745 ntBASIC5.99□□□□□ -1.45
SOX1O00570 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 OR9K1P-202ENST00000641111 3217 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 NACAP2-201ENST00000318548 624 ntBASIC5.99□□□□□ -1.45
SOX1O00570 RPL7P26-201ENST00000333817 754 ntBASIC5.99□□□□□ -1.45
SOX1O00570 RN7SKP227-201ENST00000364445 330 ntBASIC5.99□□□□□ -1.45
SOX1O00570 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 Y_RNA.387-201ENST00000383918 102 ntBASIC5.99□□□□□ -1.45
SOX1O00570 SNORA20.2-201ENST00000383922 131 ntBASIC5.99□□□□□ -1.45
SOX1O00570 SNORA16A-201ENST00000384342 137 ntBASIC5.99□□□□□ -1.45
SOX1O00570 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 AC004980.3-201ENST00000447046 365 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX1O00570 RBMY2TP-201ENST00000451162 947 ntBASIC5.99□□□□□ -1.45
SOX1O00570 RPS27AP3-201ENST00000453803 454 ntBASIC5.99□□□□□ -1.45
SOX1O00570 RPL37P3-201ENST00000456825 293 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX1O00570 AC096754.1-201ENST00000508904 818 ntBASIC5.99□□□□□ -1.45
SOX1O00570 RNU6-1170P-201ENST00000515974 106 ntBASIC5.99□□□□□ -1.45
SOX1O00570 RNU6-714P-201ENST00000516963 103 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AP003072.2-201ENST00000527756 676 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX1O00570 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.99□□□□□ -1.45
SOX1O00570 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.99□□□□□ -1.45
SOX1O00570 AC139493.1-201ENST00000604368 397 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AC121334.2-201ENST00000605387 271 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AC093799.2-201ENST00000610062 578 ntBASIC5.99□□□□□ -1.45
SOX1O00570 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 uc_338.9-201ENST00000617424 182 ntBASIC5.99□□□□□ -1.45
SOX1O00570 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SOX1O00570 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.99□□□□□ -1.45
SOX1O00570 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 AC105749.1-201ENST00000631338 2008 ntBASIC5.99□□□□□ -1.45
SOX1O00570 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.99□□□□□ -1.45
SOX1O00570 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SOX1O00570 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SOX1O00570 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
SOX1O00570 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SOX1O00570 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SOX1O00570 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.98□□□□□ -1.45
SOX1O00570 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 AC022031.1-201ENST00000585985 2593 ntBASIC5.98□□□□□ -1.45
SOX1O00570 AC013488.1-201ENST00000526618 1838 ntBASIC5.98□□□□□ -1.45
SOX1O00570 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SOX1O00570 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 RPL23AP57-201ENST00000332361 466 ntBASIC5.98□□□□□ -1.45
SOX1O00570 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SOX1O00570 RNU6-1097P-201ENST00000363586 107 ntBASIC5.98□□□□□ -1.45
SOX1O00570 Y_RNA.202-201ENST00000364083 110 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms