Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-883P-201ENST00000384597 107 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC245052.5-201ENST00000416320 649 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 PTP4A1P5-201ENST00000420305 455 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC073464.3-201ENST00000422564 712 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL590762.3-201ENST00000436372 640 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 MTCO3P20-201ENST00000454926 688 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC007991.1-201ENST00000522680 631 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC092747.2-201ENST00000545069 983 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL031985.2-201ENST00000600955 480 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC243654.2-201ENST00000612843 443 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC024341.1-201ENST00000526444 1552 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNU1-87P-201ENST00000363727 170 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNU6-283P-201ENST00000364788 107 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNU6-603P-201ENST00000411403 107 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 BX842559.1-201ENST00000419615 532 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 FAR1P1-201ENST00000427163 934 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC007563.3-201ENST00000433233 371 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL691517.1-201ENST00000440833 1235 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 TXNP1-201ENST00000441872 371 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC245517.2-201ENST00000442890 346 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 PCBP2P3-201ENST00000509726 843 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 FABP5P6-201ENST00000510588 409 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 SNORA70.14-201ENST00000516205 110 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR5AP1P-201ENST00000529730 940 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC103843.2-201ENST00000530523 682 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 RPL21P12-201ENST00000559810 515 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC006116.10-201ENST00000591836 581 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC005021.1-201ENST00000608730 355 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC069209.1-201ENST00000619282 651 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL133370.2-201ENST00000619934 439 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL356094.1-201ENST00000624663 1212 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC019080.5-201ENST00000624891 757 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL392088.2-201ENST00000637607 285 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR5AC4P-202ENST00000642086 985 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL365440.1-201ENST00000436135 2167 ntBASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
TMX2-CTNND1H3BSU7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 UBE2V1P15-201ENST00000407776 448 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC114814.2-201ENST00000419195 485 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 HIGD1AP12-201ENST00000427832 281 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 MOB1AP1-201ENST00000430903 535 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 VN1R48P-201ENST00000448149 1036 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC098824.1-201ENST00000453565 980 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 RN7SL807P-201ENST00000470923 297 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNU6-889P-201ENST00000517189 103 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms