Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC068790.4-201ENST00000602474 263 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC107214.2-201ENST00000608204 634 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC239868.4-201ENST00000608318 671 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC078899.5-201ENST00000612475 178 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC010678.1-201ENST00000614118 713 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 MIR6864-201ENST00000617935 70 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC068722.2-201ENST00000618734 544 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 MTND5P28-201ENST00000438005 1594 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SMG1P4-204ENST00000523028 4131 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 PABPC1P9-201ENST00000426076 1612 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 RNA5SP505-201ENST00000364748 108 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 RNU2-16P-201ENST00000410712 136 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 HMGB1P11-201ENST00000413899 637 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 RPS3AP9-201ENST00000417027 792 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AL121878.1-201ENST00000418638 859 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 COX6CP17-201ENST00000421389 185 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC234779.1-201ENST00000425910 285 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AL158073.1-201ENST00000426848 1104 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 RPS26P47-201ENST00000427219 348 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 BX323845.1-201ENST00000432417 179 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 RPS24P1-201ENST00000438550 371 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 RPL34P20-201ENST00000442771 351 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AL591623.2-201ENST00000449978 222 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SUMO2P2-201ENST00000456482 255 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 FAM172BP-201ENST00000487497 1089 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 FTH1P24-201ENST00000503502 462 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC018797.3-201ENST00000513388 1241 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 FTH1P11-201ENST00000517577 551 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 NMNAT1P1-201ENST00000554095 876 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 MIR5186-201ENST00000577504 120 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ZNF415P1-201ENST00000582279 1166 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 HSPE1P14-201ENST00000605812 302 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC015540.1-201ENST00000615828 501 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC006338.2-201ENST00000616864 791 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC009509.4-201ENST00000619202 509 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB1Q9Y5F3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms