Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC083843.3-201ENST00000623679 2186 ntBASIC4.78□□□□□ -1.64
PCDHB7Q9Y5E2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB7Q9Y5E2 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
PCDHB7Q9Y5E2 AL672167.1-204ENST00000641875 3017 ntBASIC4.78□□□□□ -1.64
PCDHB7Q9Y5E2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AL513185.3-201ENST00000433335 1300 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 DHX9P1-201ENST00000436565 3076 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 SNORA48.7-201ENST00000391302 135 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AL133264.1-201ENST00000407157 562 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 RNU6-628P-201ENST00000410675 107 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 LUZP4P1-201ENST00000415420 344 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AL139095.3-201ENST00000419672 1203 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AL593851.1-201ENST00000426171 157 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AL390023.1-201ENST00000428836 262 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 SKP1P3-201ENST00000429280 487 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AL132765.1-201ENST00000434165 553 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 RPL23AP52-201ENST00000439311 478 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 HSFY6P-201ENST00000445573 403 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC006511.1-201ENST00000470614 315 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 RPL35P6-201ENST00000490024 372 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 RN7SL812P-201ENST00000493791 279 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC010587.2-201ENST00000511727 448 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 MTCO3P28-201ENST00000513351 515 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 RNU6-488P-201ENST00000515918 99 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 OR8R1P-201ENST00000543943 764 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC015912.2-201ENST00000571053 181 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC005332.6-201ENST00000613178 446 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC243756.2-201ENST00000618406 463 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 AC069209.1-201ENST00000619282 651 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 MIR8059-201ENST00000620427 81 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 MKKS-204ENST00000639674 192 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 OR51H2P-202ENST00000641424 3046 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB7Q9Y5E2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AC107027.3-201ENST00000565095 3473 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 SPRR2C-201ENST00000290702 219 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 IL6STP1-201ENST00000346911 1020 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 Y_RNA.311-201ENST00000365068 96 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 MIR134-201ENST00000385258 73 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AL445189.1-201ENST00000405722 338 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 MIR1302-8-201ENST00000408342 128 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 RNU2-42P-201ENST00000410697 113 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 RNU6-603P-201ENST00000411403 107 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 RPS20P14-201ENST00000412545 360 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AC233981.1-201ENST00000423224 461 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 UBE2V1P1-201ENST00000430836 445 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AL050321.1-201ENST00000432363 400 ntBASIC4.76□□□□□ -1.65
PCDHB7Q9Y5E2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms