Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 TVP23BP1-201ENST00000557500 617 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 MIR4270-201ENST00000581799 70 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AP002906.1-201ENST00000603405 233 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC114878.2-201ENST00000604863 1251 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC091905.1-201ENST00000624400 311 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 BRAFP1-201ENST00000445336 2703 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC010733.2-201ENST00000589496 5702 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC091152.2-201ENST00000591628 2569 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 HMGB3P19-201ENST00000403971 560 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AL138799.3-201ENST00000438968 350 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 RPL12P11-201ENST00000439970 501 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 RNA5SP246-201ENST00000458909 119 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 RPL38P1-201ENST00000460914 211 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 PRDX3P4-201ENST00000470828 747 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 RPL7P24-201ENST00000493052 752 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 RN7SKP83-201ENST00000516512 178 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 HMGB1P1-201ENST00000522557 636 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 OR5D17P-201ENST00000531492 978 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AL136520.1-202ENST00000555494 763 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC099489.2-201ENST00000574976 260 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 MIR5684-201ENST00000585074 65 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC010928.3-201ENST00000587712 541 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC011492.1-201ENST00000600023 315 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC011816.2-201ENST00000607089 556 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AL445222.1-201ENST00000607259 628 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 AC090948.1-201ENST00000607464 549 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KCNIP3Q9Y2W7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 CR381670.1-201ENST00000624291 1693 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AL109941.1-201ENST00000401925 229 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC073264.1-201ENST00000411508 416 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 RPL37P18-201ENST00000411602 243 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 OR51A3P-201ENST00000413596 924 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC019070.1-201ENST00000415008 1024 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 VN1R54P-201ENST00000435210 1049 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 SKP1P1-201ENST00000438081 489 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC006994.1-201ENST00000438212 839 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 RPL36AP15-201ENST00000444514 266 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 GXYLT1P1-201ENST00000446657 490 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 NANOGP10-201ENST00000453325 895 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 RNF138P1-201ENST00000502765 546 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC023141.12-201ENST00000512399 199 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 MTCO1P30-201ENST00000515244 580 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 SUMO2P20-201ENST00000520803 283 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC113192.3-201ENST00000529152 742 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 HMGN2P28-201ENST00000606102 262 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC133644.2-201ENST00000608142 540 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC106730.3-201ENST00000624568 641 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AC068620.4-201ENST00000636730 1182 ntBASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KCNIP3Q9Y2W7 AL359893.1-201ENST00000447628 1580 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms