Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AP001636.2-201ENST00000525517 696 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AL389895.1-201ENST00000554127 252 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC079880.2-201ENST00000603790 1213 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC079610.2-201ENST00000604818 690 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC024941.1-201ENST00000612250 334 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AC243654.2-201ENST00000612843 443 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 AL445493.3-201ENST00000619568 477 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 MTND5P11-201ENST00000511037 1812 ntBASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRAPPC4Q9Y296 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 Y_RNA.110-201ENST00000363220 99 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 RNA5SP515-201ENST00000364570 118 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 RNU2-72P-201ENST00000411175 163 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AL353093.1-201ENST00000441292 436 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 RNFT1P2-201ENST00000443064 757 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 MTCYBP21-201ENST00000443300 1113 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 RPS27P5-201ENST00000444247 244 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC097499.1-201ENST00000444277 208 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 TRBV8-2-201ENST00000475637 270 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC008628.1-201ENST00000508663 265 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC027338.1-201ENST00000514840 825 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 RNU6-467P-201ENST00000517027 110 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC022790.1-201ENST00000522872 204 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AP003049.1-201ENST00000529418 457 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AP002812.4-201ENST00000532139 286 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC006960.3-201ENST00000561845 705 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 ZNF92P3-201ENST00000596594 954 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 SNORA62.6-201ENST00000606322 83 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC099676.1-201ENST00000608886 657 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC005344.1-201ENST00000613391 459 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 C2orf27A-204ENST00000623058 969 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 FP236240.3-201ENST00000623061 327 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC097460.3-201ENST00000623099 442 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AP004289.2-201ENST00000444413 1457 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 AC066616.2-201ENST00000559334 1481 ntBASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRAPPC4Q9Y296 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.4□□□□□ -1.86
TRAPPC4Q9Y296 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRAPPC4Q9Y296 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRAPPC4Q9Y296 RNU6-650P-201ENST00000365658 111 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 MIR30B-201ENST00000384850 88 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 RNA5SP424-201ENST00000390988 115 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 HMGB1P13-201ENST00000406019 642 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AL158825.1-201ENST00000414735 521 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 OSTCP5-201ENST00000425293 453 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AL591419.1-201ENST00000427423 339 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 EIF2S2P3-201ENST00000428356 999 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 FO393419.3-201ENST00000428741 282 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 PTP4A1P3-201ENST00000433661 420 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC087312.1-201ENST00000471411 480 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AP000893.1-201ENST00000474462 794 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC087385.1-201ENST00000475062 312 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 ACTG1P13-201ENST00000486987 1043 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 NPM1P41-201ENST00000512920 831 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
TRAPPC4Q9Y296 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms