Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC020914.4-201ENST00000597690 277 ntBASIC5.1□□□□□ -1.59
RIMBP3Q9UFD9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.1□□□□□ -1.59
RIMBP3Q9UFD9 AL732372.2-225ENST00000642124 456 ntBASIC5.1□□□□□ -1.59
RIMBP3Q9UFD9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RIMBP3Q9UFD9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 AL645937.1-202ENST00000421799 937 ntBASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 EIF4EP1-201ENST00000422311 642 ntBASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 KLKP1-201ENST00000595979 403 ntBASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 SNORD39.4-201ENST00000620099 78 ntBASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 AC092184.1-201ENST00000625042 715 ntBASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RIMBP3Q9UFD9 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.09□□□□□ -1.6
RIMBP3Q9UFD9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.09□□□□□ -1.6
RIMBP3Q9UFD9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.09□□□□□ -1.6
RIMBP3Q9UFD9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RIMBP3Q9UFD9 Y_RNA.466-201ENST00000384294 113 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 MIR34A-201ENST00000385130 110 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 RNU6-548P-201ENST00000517083 115 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC026333.2-201ENST00000542164 106 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC079600.2-201ENST00000550076 130 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC015712.3-201ENST00000559380 164 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AL353600.1-201ENST00000608148 251 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC128687.2-201ENST00000609657 566 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 CR383658.2-201ENST00000547576 1525 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AP000542.2-201ENST00000623199 6179 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 MIR184-201ENST00000384962 84 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 MTND4P22-201ENST00000413116 1169 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 DPPA2P2-201ENST00000418220 897 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 ANP32BP2-201ENST00000454525 545 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 RPS3P1-201ENST00000456781 192 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 CYCSP39-201ENST00000565821 309 ntBASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RIMBP3Q9UFD9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 ZNF72P-201ENST00000425869 1908 ntBASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 KATNBL1P2-201ENST00000433311 835 ntBASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 AC096638.2-201ENST00000434965 711 ntBASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 RPS4XP2-201ENST00000458402 793 ntBASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 RNA5SP458-201ENST00000516188 119 ntBASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 AC099063.3-201ENST00000642066 185 ntBASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.07□□□□□ -1.6
RIMBP3Q9UFD9 AL031595.2-201ENST00000624215 19071 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 SNORD67-201ENST00000390833 111 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 RNU2-52P-201ENST00000410680 190 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 HSPE1P16-201ENST00000426640 348 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 RPS29P21-201ENST00000496272 170 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 AC138761.3-201ENST00000579993 334 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 AC012603.1-201ENST00000606424 528 ntBASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RIMBP3Q9UFD9 RNU1-108P-201ENST00000362556 161 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 MIR1289-2-201ENST00000408360 111 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 AL356968.1-201ENST00000416622 474 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 FTH1P6-201ENST00000430768 320 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 SNORD109B-201ENST00000458961 67 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 SNORD109A-201ENST00000459128 67 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 AP000926.4-201ENST00000527351 454 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 AC044913.1-201ENST00000557200 430 ntBASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RIMBP3Q9UFD9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms