Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR449B-201ENST00000384995 97 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC008173.1-201ENST00000418901 264 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RPL37P1-201ENST00000432310 284 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AL512661.1-201ENST00000434586 1253 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 HMGB1P16-201ENST00000447155 540 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 UBDP1-202ENST00000457888 382 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC084198.1-201ENST00000477747 402 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC108941.1-201ENST00000502853 530 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC008565.1-201ENST00000509046 885 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RAC1P2-201ENST00000511164 579 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 DEFB109D-201ENST00000529497 240 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 GTF2IP22-201ENST00000554443 182 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC012254.4-201ENST00000588843 273 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 BNIP3P33-201ENST00000598912 569 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 NTAN1P1-201ENST00000603150 646 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 SNORA62.6-201ENST00000606322 83 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 SNORA51-201ENST00000606420 132 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 RNU1-30P-201ENST00000606575 163 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC245100.7-201ENST00000609678 442 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 FRG1HP-204ENST00000617940 757 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC073569.3-201ENST00000619055 682 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC000123.2-201ENST00000623124 461 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AL359715.5-201ENST00000623431 443 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AL627171.1-201ENST00000618845 1308 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 SAGE2P-201ENST00000420011 2126 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 AC106871.1-201ENST00000568324 3102 ntBASIC3.37□□□□□ -1.87
CLCF1Q9UBD9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC027287.1-201ENST00000553115 1453 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 ENSAP3-201ENST00000312710 333 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 SNORD56.4-201ENST00000363883 71 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC092745.2-202ENST00000411880 369 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 MTCO1P43-201ENST00000431831 488 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 SETP6-201ENST00000479329 568 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 RPL21P47-201ENST00000483696 477 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 RN7SKP283-201ENST00000517197 270 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC010306.1-201ENST00000523223 1117 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC083923.1-201ENST00000523708 376 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC090877.1-201ENST00000561418 344 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC093510.2-201ENST00000562820 896 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC090312.2-201ENST00000582687 378 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 MRPS35P3-201ENST00000603189 709 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AL137849.1-201ENST00000604767 169 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 RPL21P136-201ENST00000605378 396 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC243756.2-201ENST00000618406 463 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 MIR6075-201ENST00000620782 95 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AP006248.2-201ENST00000623309 592 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC132825.7-201ENST00000638744 335 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 AC083899.2-201ENST00000423285 1376 ntBASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.36□□□□□ -1.87
CLCF1Q9UBD9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 AC018555.1-201ENST00000567548 1980 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
CLCF1Q9UBD9 RN7SKP44-201ENST00000363602 316 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms