Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN1Q9P244 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
LRFN1Q9P244 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN1Q9P244 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 RPL23AP57-201ENST00000332361 466 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNVU1-3-201ENST00000364313 161 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNU4-40P-201ENST00000364351 143 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNU6-253P-201ENST00000384730 105 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 DHFRP6-201ENST00000401776 268 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL355379.1-201ENST00000405542 640 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 FNDC3CP-201ENST00000420795 1155 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 USP9YP26-201ENST00000421008 661 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 ZYG11AP1-201ENST00000430329 837 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 RPL34P6-201ENST00000432390 345 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 SETP8-201ENST00000435341 628 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 SLC25A18P1-201ENST00000449385 454 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNU7-125P-201ENST00000458760 62 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNU7-136P-201ENST00000458819 69 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 RN7SL481P-201ENST00000477764 299 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL049874.2-201ENST00000492636 288 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNU6-678P-201ENST00000516832 109 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 RNU6-232P-201ENST00000517144 64 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC135628.1-201ENST00000568867 534 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 MIR4270-201ENST00000581799 70 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 KPNA2P3-201ENST00000584190 848 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL355812.1-201ENST00000603215 216 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL392048.1-201ENST00000613946 534 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AC108359.1-201ENST00000616451 1211 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL136964.1-201ENST00000622038 2990 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LRFN1Q9P244 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 SAMMSON-226ENST00000642089 1582 ntBASIC4.56□□□□□ -1.68
LRFN1Q9P244 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN1Q9P244 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AC087359.1-201ENST00000508335 1740 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 RNU6-462P-201ENST00000362659 105 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 MT-TC-201ENST00000387405 66 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL121972.1-201ENST00000402023 252 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 TPMTP2-201ENST00000414372 726 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 C4BPAP2-201ENST00000428434 478 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AC091390.1-201ENST00000433904 331 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL445567.1-201ENST00000439121 144 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.55□□□□□ -1.68
LRFN1Q9P244 BZW1P2-201ENST00000473537 826 ntBASIC4.55□□□□□ -1.68
LRFN1Q9P244 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms