Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC092470.1-201ENST00000546187 132 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 BNIP3P1-201ENST00000547295 580 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OR11J2P-201ENST00000555298 907 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 MIR5697-201ENST00000578045 78 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC090312.1-201ENST00000580637 348 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RN7SL356P-201ENST00000582228 248 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC103792.1-201ENST00000603591 919 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AL513477.2-201ENST00000607858 568 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC006566.1-201ENST00000608943 513 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 LINC01963-201ENST00000562038 3148 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC021242.1-201ENST00000507315 2035 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AL138820.1-201ENST00000617901 5305 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC011155.1-201ENST00000316512 456 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RNY4P24-201ENST00000362735 96 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 MIR551A-201ENST00000385042 96 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC009804.1-201ENST00000400949 179 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL359643.1-201ENST00000404109 423 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 Y_RNA.598-201ENST00000410480 95 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RN7SKP33-201ENST00000410942 340 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL133325.1-201ENST00000421090 382 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RAD23BP1-201ENST00000421404 1227 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 MTCO2P5-201ENST00000422621 426 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL356583.2-201ENST00000426536 280 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC092017.2-201ENST00000427600 362 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC010975.2-201ENST00000427781 588 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 NPM1P34-201ENST00000428821 893 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 OR2B8P-201ENST00000432841 938 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RPS3AP54-201ENST00000435535 734 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RSU1P2-202ENST00000437884 485 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC091862.1-201ENST00000438016 1100 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 GDI2P2-201ENST00000445131 608 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC002381.1-201ENST00000447049 280 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 BX842559.2-201ENST00000451418 605 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 snoU109.1-201ENST00000459339 135 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 PLGLA-201ENST00000465668 449 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL136126.1-201ENST00000473603 402 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RPS4XP1-201ENST00000482189 787 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 SNORD116-26-201ENST00000516006 96 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 DPPA2P4-201ENST00000563717 878 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC053481.3-201ENST00000577881 843 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC022916.3-201ENST00000592961 742 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 BNIP3P8-201ENST00000597863 560 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC107304.1-201ENST00000604229 296 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC015914.2-201ENST00000618167 288 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AL603839.4-201ENST00000624658 1005 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 AC023421.1-201ENST00000590535 1785 ntBASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.01□□□□□ -1.61
CCM2LQ9NUG4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms