Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SNRPGP9-201ENST00000456025 225 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AC138761.3-201ENST00000579993 334 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AL162574.2-201ENST00000614618 657 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AP000432.2-201ENST00000624164 2048 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AC069285.2-201ENST00000440210 275 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 RPS29P31-201ENST00000446147 164 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AP002812.4-201ENST00000532139 286 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 AC126323.6-202ENST00000568092 3511 ntBASIC3.08□□□□□ -1.92
CHD8Q9HCK8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHD8Q9HCK8 Y_RNA.595-201ENST00000410403 105 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC019097.1-201ENST00000424783 735 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 H3F3AP1-201ENST00000559984 334 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 RN7SKP220-201ENST00000410611 288 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC011742.1-201ENST00000431448 434 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 HSPE1P6-201ENST00000479457 291 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC112198.1-201ENST00000505369 1220 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 HMGB1P6-201ENST00000569046 646 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.07□□□□□ -1.92
CHD8Q9HCK8 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.07□□□□□ -1.92
CHD8Q9HCK8 AL161781.1-201ENST00000354277 403 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AL135786.1-201ENST00000415892 214 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC123768.4-201ENST00000616244 701 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 BX119904.1-201ENST00000432026 348 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 TAF9P1-201ENST00000445421 515 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 TAF9P2-201ENST00000454958 515 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 UBA52P3-201ENST00000491303 382 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC008549.1-201ENST00000512900 643 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 RNA5SP356-201ENST00000515972 94 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 MIR4648-201ENST00000580107 72 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AL162713.1-201ENST00000604480 262 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 NCOA4P2-201ENST00000340589 1813 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 Y_RNA.140-201ENST00000363474 103 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC007899.1-201ENST00000412776 775 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC133473.1-201ENST00000455173 299 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 RPL12P25-201ENST00000455592 494 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 TCP11X3P-202ENST00000514289 1254 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC127024.5-201ENST00000580085 462 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
CHD8Q9HCK8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms