Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC009643.1-201ENST00000532030 391 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AL031985.2-201ENST00000600955 480 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RPL26P30-202ENST00000602923 645 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC073091.2-201ENST00000603205 907 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AP000811.1-201ENST00000603803 651 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AL390816.3-201ENST00000604527 1066 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC069209.1-201ENST00000619282 651 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 CR381670.1-201ENST00000624291 1693 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 KARSP3-201ENST00000571212 1504 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 RNU6-582P-201ENST00000362989 107 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 RNU6-178P-201ENST00000384631 104 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AL138880.1-201ENST00000405824 642 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 RPL21P91-201ENST00000429231 479 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 RPS27AP15-201ENST00000447672 466 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AL034418.1-201ENST00000448675 860 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ISCUP1-201ENST00000454451 448 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC068587.1-201ENST00000483613 781 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC008885.2-201ENST00000509506 930 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 MTCYBP37-201ENST00000510642 1133 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 TOMM20P2-201ENST00000540082 421 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC007115.1-201ENST00000546853 234 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 RPL21P7-201ENST00000557463 483 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC090116.1-201ENST00000615679 446 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 AC006338.2-201ENST00000616864 791 ntBASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP29Q9HBJ7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AC022031.1-201ENST00000585985 2593 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL390237.1-201ENST00000404226 1415 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
USP29Q9HBJ7 AL391684.1-202ENST00000641293 1636 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 RNU6-623P-201ENST00000363143 105 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SNORA70.2-201ENST00000364506 135 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SUGT1P1-201ENST00000379514 476 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 SNORA70F-201ENST00000384142 135 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 Y_RNA.560-201ENST00000384689 102 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 MIR92A2-201ENST00000385299 75 ntBASIC4.73□□□□□ -1.65
USP29Q9HBJ7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms