Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 Z99289.3-201ENST00000605586 594 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AC091979.2-201ENST00000607514 214 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AC091304.6-201ENST00000619761 202 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AP000484.1-201ENST00000620067 1252 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AC006065.5-201ENST00000623427 349 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AC120349.2-201ENST00000625002 298 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.34□□□□□ -1.71
BRF2Q9HAW0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRF2Q9HAW0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.34□□□□□ -1.71
BRF2Q9HAW0 AC139769.1-204ENST00000472297 1931 ntBASIC4.34□□□□□ -1.71
BRF2Q9HAW0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.34□□□□□ -1.72
BRF2Q9HAW0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRF2Q9HAW0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
BRF2Q9HAW0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.34□□□□□ -1.72
BRF2Q9HAW0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.34□□□□□ -1.72
BRF2Q9HAW0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC010928.1-201ENST00000592477 1447 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RNA5SP307-201ENST00000362863 116 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RNU6-1214P-201ENST00000363650 109 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RNU6-621P-201ENST00000364752 109 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RNA5SP397-201ENST00000391323 118 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AL355379.1-201ENST00000405542 640 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RPL7P53-201ENST00000421245 739 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC092447.3-201ENST00000426027 686 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AL359265.2-201ENST00000434367 631 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 MTND2P20-201ENST00000440805 661 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC073587.1-201ENST00000447093 876 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RPL7P18-201ENST00000478965 734 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 MTND2P14-201ENST00000482139 351 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC010587.2-201ENST00000511727 448 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 UBTFL10-201ENST00000528532 562 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 OR5D15P-201ENST00000531671 942 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RN7SL690P-201ENST00000582087 240 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC004987.4-201ENST00000603383 338 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC103792.1-201ENST00000603591 919 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 DPRXP5-201ENST00000604662 539 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC078899.5-201ENST00000612475 178 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC008083.4-201ENST00000615076 444 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 AC092184.1-201ENST00000625042 715 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 MIR4278-201ENST00000636094 69 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 MIR1322-201ENST00000638013 71 ntBASIC4.33□□□□□ -1.72
BRF2Q9HAW0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
BRF2Q9HAW0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 GDI2P1-201ENST00000429312 1336 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 Y_RNA.311-201ENST00000365068 96 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 SNORA51.6-201ENST00000384151 125 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC119751.3-201ENST00000399720 670 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL162591.2-201ENST00000449634 317 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC012671.1-201ENST00000451912 203 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 DDX39BP2-208ENST00000453923 258 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 MTCYBP37-201ENST00000510642 1133 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 HMGB3P13-201ENST00000511263 607 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 DUXAP5-201ENST00000529668 529 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 PDCL2P2-201ENST00000533651 189 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms