Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RNU6-420P-201ENST00000458780 107 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RPS20P20-201ENST00000460498 340 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL161747.1-201ENST00000480068 358 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 RPL39P36-201ENST00000490784 156 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AP003181.2-201ENST00000528941 181 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC022404.1-201ENST00000555320 273 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 MRPS21P7-201ENST00000566937 238 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 NRBF2P1-201ENST00000587407 859 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC011712.1-201ENST00000588959 234 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC011445.2-201ENST00000599274 173 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 CKS1BP3-201ENST00000600888 237 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL162413.1-201ENST00000603198 110 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC104695.2-201ENST00000605056 775 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL139124.1-201ENST00000609123 421 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.812-201ENST00000610788 101 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.784-201ENST00000613803 101 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 MIR7973-1-201ENST00000614683 76 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.787-201ENST00000616522 101 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.780-201ENST00000617336 101 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.801-201ENST00000619005 101 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 YWHAEP7-203ENST00000622054 312 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL355480.1-201ENST00000629041 99 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AL121950.1-201ENST00000624993 2077 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 AC006210.2-201ENST00000367074 1545 ntBASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SEC61A2Q9H9S3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 AL645937.1-201ENST00000641739 1652 ntBASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 AC007996.1-201ENST00000620414 2821 ntBASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SEC61A2Q9H9S3 RN7SKP145-201ENST00000363291 303 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-767P-201ENST00000384132 107 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-769P-201ENST00000384407 104 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 SNORD56.6-201ENST00000384569 71 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-878P-201ENST00000384578 110 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 MIR506-201ENST00000384998 124 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-908P-201ENST00000410160 94 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 BMS1P17-202ENST00000416720 316 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 BTF3L4P3-201ENST00000418879 476 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 SDCBPP2-201ENST00000424643 885 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 NANOGP6-201ENST00000429190 847 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RPEP2-201ENST00000432149 701 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 TAAR7P-201ENST00000436141 242 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AL390119.1-201ENST00000440329 312 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC073465.2-201ENST00000440938 498 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RPL23AP20-201ENST00000447965 421 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC132479.1-201ENST00000449160 144 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 BX842559.2-201ENST00000451418 605 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 MTND1P12-201ENST00000455231 147 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 RN7SL583P-201ENST00000475692 287 ntBASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.9□□□□□ -1.63
SEC61A2Q9H9S3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms