Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-298P-201ENST00000390888 96 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RNU6-272P-201ENST00000411028 104 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RPS12P23-201ENST00000419579 400 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL158071.1-201ENST00000430315 461 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RPL21P110-201ENST00000433345 446 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 ARF4P4-201ENST00000439608 520 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RPL12P3-201ENST00000440080 396 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 TXNP1-201ENST00000441872 371 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 SEPT14P24-201ENST00000447236 180 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL050341.1-201ENST00000447743 313 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC233982.1-201ENST00000451247 436 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RPS3AP41-201ENST00000462701 778 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RPS27P23-201ENST00000487608 251 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 FCF1P3-201ENST00000496394 590 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC110768.1-201ENST00000509222 400 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 BRD9P1-201ENST00000529855 560 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC091516.1-201ENST00000549191 703 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 ZNF971P-201ENST00000562068 1249 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 MIR5047-201ENST00000579212 100 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 VN1R88P-201ENST00000596787 292 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL020997.3-201ENST00000602843 359 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC091488.1-201ENST00000604239 660 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC133644.2-201ENST00000608142 540 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL121652.1-201ENST00000608851 448 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL450489.1-201ENST00000612071 468 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AL391262.2-201ENST00000622466 494 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 AC013437.2-201ENST00000639587 677 ntBASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VIPAS39Q9H9C1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC046144.1-201ENST00000478559 1853 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AP001486.2-201ENST00000561652 5113 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 CASC19-261ENST00000641853 1638 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 MTCO1P6-201ENST00000481192 1384 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC073073.2-201ENST00000609827 2578 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AP002088.1-201ENST00000382740 395 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 RNU6-1257P-201ENST00000384625 110 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 RNU6-925P-201ENST00000384629 104 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 PRRC2CP1-201ENST00000404428 159 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 RN7SKP278-201ENST00000410504 342 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 PAICSP7-201ENST00000419829 962 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC007394.1-201ENST00000421941 531 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 RPL30P3-201ENST00000424262 333 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 YWHAZP8-201ENST00000436935 731 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 HMGB1P48-201ENST00000446155 598 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 RPS3AP53-201ENST00000454716 778 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 NAP1L1P3-201ENST00000462291 880 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC104689.1-201ENST00000473356 768 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC108941.1-201ENST00000502853 530 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC124293.1-201ENST00000530034 493 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 VN1R87P-201ENST00000596706 487 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC008687.2-201ENST00000597865 520 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC115621.1-201ENST00000604653 858 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AP002802.2-201ENST00000605877 235 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC144521.1-201ENST00000607148 956 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 VN1R74P-201ENST00000613259 503 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC090510.2-201ENST00000617465 629 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC084824.4-201ENST00000620106 731 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AL109659.3-201ENST00000624985 950 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 DHX40P1-201ENST00000588725 1412 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AL139811.1-201ENST00000424779 2299 ntBASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.92□□□□□ -1.78
VIPAS39Q9H9C1 AC090229.1-201ENST00000590983 1609 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms