Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC036176.3-201ENST00000602456 418 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AL022099.1-201ENST00000604551 712 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC008555.7-201ENST00000605008 583 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC245389.1-201ENST00000605141 529 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 CTHRC1P1-201ENST00000605383 469 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC141002.1-201ENST00000607025 279 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 OR6R2P-201ENST00000609216 300 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC087588.2-201ENST00000617667 426 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 MIR6849-201ENST00000618543 69 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 uc_338.22-201ENST00000622722 187 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC135068.12-201ENST00000637370 931 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC000095.2-202ENST00000637415 154 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AC097714.1-201ENST00000511272 1647 ntBASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.23□□□□□ -1.41
PHACTR1Q9C0D0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AP001350.1-201ENST00000601906 1524 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 Y_RNA.28-201ENST00000362554 111 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 RNU6-522P-201ENST00000364497 107 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AL024474.1-201ENST00000404655 591 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 RN7SKP235-201ENST00000410662 305 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MYL6P5-201ENST00000412707 459 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 OR7E116P-201ENST00000448529 957 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 PPIAP32-201ENST00000449940 472 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 NANOGP10-201ENST00000453325 895 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AL133244.1-201ENST00000456007 258 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AC018797.3-201ENST00000513388 1241 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 RNA5SP92-201ENST00000516437 110 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 RNU6-794P-201ENST00000517261 64 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 COPS8P3-201ENST00000526024 482 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MIR3149-201ENST00000584629 83 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AC244517.12-201ENST00000623581 663 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 AP002512.4-202ENST00000641599 4530 ntBASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PHACTR1Q9C0D0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PHACTR1Q9C0D0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PHACTR1Q9C0D0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PHACTR1Q9C0D0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 THAP12P9-201ENST00000503971 2360 ntBASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 U3.12-201ENST00000364498 214 ntBASIC6.21□□□□□ -1.42
PHACTR1Q9C0D0 Y_RNA.414-201ENST00000384011 101 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms