Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 PANDAR-201ENST00000629595 1506 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 MTND4P16-201ENST00000466108 1367 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AP001273.1-201ENST00000624493 3152 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 RNU6-259P-201ENST00000383999 107 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 MIR765-201ENST00000390226 114 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 RNU2-28P-201ENST00000410457 189 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC016397.1-201ENST00000412463 242 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 EIF1P1-201ENST00000421436 341 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC092427.1-201ENST00000439177 601 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AL450023.3-201ENST00000440592 271 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 EEF1E1P1-201ENST00000446998 430 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 MTND4P18-201ENST00000447010 465 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AP000797.1-201ENST00000478870 387 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 RPS4XP1-201ENST00000482189 787 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 OR51K1P-201ENST00000510214 950 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC109464.2-201ENST00000510242 943 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 KRT19P6-201ENST00000510983 209 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 RN7SKP298-201ENST00000515950 94 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 RNU6-1178P-201ENST00000516674 107 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 ZNF519P3-201ENST00000557158 1032 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC091489.2-201ENST00000566263 604 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 PSMA6P4-201ENST00000603247 718 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC243773.3-201ENST00000613270 256 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC025588.4-201ENST00000615802 908 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AL122125.1-201ENST00000616999 600 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC022306.2-201ENST00000617563 647 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 SEPT14P19-203ENST00000633205 211 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 LINC00561-201ENST00000565815 2738 ntBASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.67□□□□□ -1.66
AMBRA1Q9C0C7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AC009313.2-201ENST00000417893 1941 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AC092079.1-201ENST00000558620 1985 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 RN7SKP113-201ENST00000363891 295 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 MIR600-201ENST00000385007 98 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 RPS24P12-201ENST00000402084 394 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AL592291.1-201ENST00000403830 352 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AP000580.1-201ENST00000404439 358 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 Y_RNA.604-201ENST00000410574 102 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 BX323845.1-201ENST00000432417 179 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AC091862.1-201ENST00000438016 1100 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AC002553.2-201ENST00000453217 340 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 AL691482.1-201ENST00000453255 87 ntBASIC4.66□□□□□ -1.66
AMBRA1Q9C0C7 TRGVB-201ENST00000453257 471 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms