Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC022431.1-201ENST00000450941 438 ntBASIC4.91□□□□□ -1.62
SMOQ99835 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.91□□□□□ -1.62
SMOQ99835 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.91□□□□□ -1.62
SMOQ99835 CFTRP1-201ENST00000456646 183 ntBASIC4.91□□□□□ -1.62
SMOQ99835 RPS15AP1-201ENST00000457423 391 ntBASIC4.91□□□□□ -1.62
SMOQ99835 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.91□□□□□ -1.62
SMOQ99835 OR52A4P-201ENST00000472867 958 ntBASIC4.91□□□□□ -1.62
SMOQ99835 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 RN7SL459P-201ENST00000481078 302 ntBASIC4.91□□□□□ -1.62
SMOQ99835 RPS4XP15-201ENST00000489210 795 ntBASIC4.91□□□□□ -1.62
SMOQ99835 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.91□□□□□ -1.62
SMOQ99835 HMGB3P16-201ENST00000508037 287 ntBASIC4.91□□□□□ -1.62
SMOQ99835 AC007016.1-201ENST00000512110 244 ntBASIC4.91□□□□□ -1.62
SMOQ99835 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.91□□□□□ -1.62
SMOQ99835 RNU6-202P-201ENST00000515998 96 ntBASIC4.91□□□□□ -1.62
SMOQ99835 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.91□□□□□ -1.62
SMOQ99835 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.91□□□□□ -1.62
SMOQ99835 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.91□□□□□ -1.62
SMOQ99835 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.91□□□□□ -1.62
SMOQ99835 AC087683.1-201ENST00000591187 441 ntBASIC4.91□□□□□ -1.62
SMOQ99835 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 U3.53-201ENST00000628922 216 ntBASIC4.91□□□□□ -1.62
SMOQ99835 DHX9P1-201ENST00000436565 3076 ntBASIC4.91□□□□□ -1.62
SMOQ99835 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 PCAT14-202ENST00000627127 3935 ntBASIC4.91□□□□□ -1.62
SMOQ99835 CR383658.2-201ENST00000547576 1525 ntBASIC4.91□□□□□ -1.62
SMOQ99835 OR5BR1P-201ENST00000524992 1330 ntBASIC4.91□□□□□ -1.62
SMOQ99835 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMOQ99835 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMOQ99835 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SMOQ99835 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMOQ99835 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.91□□□□□ -1.62
SMOQ99835 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.91□□□□□ -1.62
SMOQ99835 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.91□□□□□ -1.62
SMOQ99835 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMOQ99835 AL136164.3-201ENST00000624429 3978 ntBASIC4.9□□□□□ -1.62
SMOQ99835 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SMOQ99835 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SMOQ99835 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SMOQ99835 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SMOQ99835 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SMOQ99835 AC016716.1-201ENST00000265882 708 ntBASIC4.9□□□□□ -1.63
SMOQ99835 OR4K15-201ENST00000305051 1216 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AC021146.4-201ENST00000309229 279 ntBASIC4.9□□□□□ -1.63
SMOQ99835 RNU6-433P-201ENST00000363216 104 ntBASIC4.9□□□□□ -1.63
SMOQ99835 RNU6-216P-201ENST00000363282 104 ntBASIC4.9□□□□□ -1.63
SMOQ99835 RNA5SP88-201ENST00000365560 109 ntBASIC4.9□□□□□ -1.63
SMOQ99835 SNORA75-201ENST00000384158 137 ntBASIC4.9□□□□□ -1.63
SMOQ99835 RNY3P10-201ENST00000384764 102 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 UBE2V1P10-201ENST00000414685 269 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 AC241584.1-201ENST00000438469 1241 ntBASIC4.9□□□□□ -1.63
SMOQ99835 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.9□□□□□ -1.63
SMOQ99835 AL512286.1-201ENST00000439244 400 ntBASIC4.9□□□□□ -1.63
SMOQ99835 ACTR3P2-201ENST00000439585 1257 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.9□□□□□ -1.63
SMOQ99835 COX6CP12-201ENST00000446748 202 ntBASIC4.9□□□□□ -1.63
SMOQ99835 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 SLC31A1P1-201ENST00000451221 567 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.9□□□□□ -1.63
SMOQ99835 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 SRRM1P2-201ENST00000464531 1192 ntBASIC4.9□□□□□ -1.63
SMOQ99835 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.9□□□□□ -1.63
SMOQ99835 AC090013.1-201ENST00000485147 480 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AC020890.1-201ENST00000491837 504 ntBASIC4.9□□□□□ -1.63
SMOQ99835 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SMOQ99835 MTCYBP17-201ENST00000503579 789 ntBASIC4.9□□□□□ -1.63
SMOQ99835 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SMOQ99835 AC113430.1-201ENST00000506872 718 ntBASIC4.9□□□□□ -1.63
SMOQ99835 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.9□□□□□ -1.63
SMOQ99835 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.9□□□□□ -1.63
SMOQ99835 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.9□□□□□ -1.63
SMOQ99835 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 KPNA2P3-201ENST00000584190 848 ntBASIC4.9□□□□□ -1.63
SMOQ99835 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.9□□□□□ -1.63
SMOQ99835 AC012360.2-201ENST00000609349 391 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AL356121.2-201ENST00000624715 780 ntBASIC4.9□□□□□ -1.63
SMOQ99835 AC079228.1-201ENST00000624774 1049 ntBASIC4.9□□□□□ -1.63
SMOQ99835 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.9□□□□□ -1.63
SMOQ99835 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SMOQ99835 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMOQ99835 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMOQ99835 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SMOQ99835 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms