Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 Y_RNA.25-201ENST00000362528 102 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 RNU6-444P-201ENST00000383988 108 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AL359643.1-201ENST00000404109 423 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 TIMM9P2-201ENST00000419324 266 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 IFNNP1-201ENST00000429219 553 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC241584.1-201ENST00000438469 1241 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 RPL30P6-201ENST00000475925 342 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 ATP1B1P1-201ENST00000509767 915 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 RNU6-678P-201ENST00000516832 109 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 IGKV1-32-201ENST00000519290 311 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC027309.2-201ENST00000520566 192 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 OR5M2P-201ENST00000529003 936 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AL590229.1-201ENST00000603497 542 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC008966.2-201ENST00000606157 453 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC245297.2-201ENST00000610119 565 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC005962.2-201ENST00000611427 652 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 Mico1.1-201ENST00000611698 204 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC008083.4-201ENST00000615076 444 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC100827.5-201ENST00000615883 426 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 Y_RNA.318-201ENST00000365131 97 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RPS24P12-201ENST00000402084 394 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AL121978.1-201ENST00000402778 359 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RN7SKP106-201ENST00000410832 272 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 CEACAMP8-201ENST00000413902 580 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RBMY2KP-201ENST00000418221 992 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 Z74021.1-201ENST00000423610 407 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 YWHAZP8-201ENST00000436935 731 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC092473.1-201ENST00000441098 221 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 Z80107.2-201ENST00000445127 392 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC073387.1-201ENST00000453261 709 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 DDX39BP2-208ENST00000453923 258 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 ISCUP1-201ENST00000454451 448 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 MTCO3P16-201ENST00000454456 754 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AL445433.1-201ENST00000457507 257 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RPL7P38-201ENST00000488396 739 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC104685.1-201ENST00000502445 371 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RNY4P37-201ENST00000516225 96 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 SOD1P3-201ENST00000518682 454 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC105129.1-201ENST00000560250 297 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 EIF5A2P1-201ENST00000564027 460 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC012435.1-202ENST00000568772 240 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 MIR3915-201ENST00000578518 97 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC091178.1-203ENST00000584586 279 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AP000811.1-201ENST00000603803 651 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AL133338.2-201ENST00000604292 736 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC018714.1-201ENST00000605028 208 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AL596275.2-204ENST00000641628 552 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AL596275.2-206ENST00000641957 626 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 AC108751.5-201ENST00000492880 1336 ntBASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP3Q96JB5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms