Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-751P-201ENST00000516382 101 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 MIR2114-201ENST00000516645 80 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 RNA5SP143-201ENST00000516936 115 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 HMGB1P23-201ENST00000518743 568 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 AC023161.2-201ENST00000551218 780 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 AL121594.4-201ENST00000556211 1196 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 AC069304.3-201ENST00000603938 1084 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 NCAPGP1-201ENST00000505112 1814 ntBASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ECHDC3Q96DC8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC007823.1-201ENST00000569932 1566 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 GTF2H2B-203ENST00000508065 1432 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 MIR153-1-201ENST00000384914 90 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 RNU6-328P-201ENST00000390887 106 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 SNORA48.7-201ENST00000391302 135 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 CCNB2P1-201ENST00000399411 1150 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 MOB1AP1-201ENST00000430903 535 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC091286.1-201ENST00000431233 461 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC010655.1-201ENST00000449336 292 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC073387.1-201ENST00000453261 709 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 RPL23AP62-201ENST00000463396 453 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC008489.1-201ENST00000524271 483 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 TRAV15-201ENST00000556680 249 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 MTATP6P25-201ENST00000574491 261 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 KLKP1-201ENST00000595979 403 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 MFSD8-236ENST00000641509 4050 ntBASIC3.64□□□□□ -1.83
ECHDC3Q96DC8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 RNU1-85P-201ENST00000364127 164 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AL359837.1-201ENST00000381357 287 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 MIR449B-201ENST00000384995 97 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 RPL37P1-201ENST00000432310 284 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 TVP23BP2-201ENST00000455082 615 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 RPS20P32-201ENST00000456044 356 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 RPL21P103-201ENST00000479921 488 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 TRAV31-201ENST00000502780 342 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC005798.1-201ENST00000513715 387 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 MIR4429-201ENST00000580105 73 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 CR589904.2-201ENST00000612533 440 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC069209.1-201ENST00000619282 651 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AC138649.5-201ENST00000637456 137 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 AL732372.2-225ENST00000642124 456 ntBASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ECHDC3Q96DC8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 RNU6-40P-201ENST00000384254 107 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms