Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC004924.1-201ENST00000480160 781 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 RNA5SP341-201ENST00000516261 117 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 CKS1BP3-201ENST00000600888 237 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 BNIP3P10-201ENST00000605360 577 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AL592295.2-201ENST00000612578 206 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AC068722.2-201ENST00000618734 544 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 AL356489.2-201ENST00000566968 3528 ntBASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHROOM3Q8TF72 SPATA2P1-201ENST00000431223 2055 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 MIR449A-201ENST00000362113 91 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 RNU6-283P-201ENST00000364788 107 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 ISCA1P2-201ENST00000438679 421 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AF117829.1-206ENST00000621883 3802 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 OR52B1P-201ENST00000316506 909 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 SUMO2P4-201ENST00000504193 276 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 IGKV2-26-201ENST00000518305 343 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.42□□□□□ -1.86
SHROOM3Q8TF72 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 AMD1P2-201ENST00000412936 992 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 GLRXP1-201ENST00000423261 334 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 ETF1P3-201ENST00000430422 1160 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 HMGB3P14-201ENST00000494195 599 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 OR2A20P-203ENST00000498397 1268 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 AL354950.1-201ENST00000614150 568 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 AL365440.1-201ENST00000436135 2167 ntBASIC3.41□□□□□ -1.86
SHROOM3Q8TF72 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 SNORA54-201ENST00000384281 123 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC104297.1-201ENST00000393779 870 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 HMGN1P24-201ENST00000412282 298 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AL024507.1-201ENST00000412741 274 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 RSL24D1P3-201ENST00000449255 495 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 RBMY2UP-201ENST00000453474 324 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 CYCSP20-201ENST00000473154 315 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC138409.2-202ENST00000507274 458 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC103843.2-201ENST00000530523 682 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 CR383656.14-201ENST00000551951 406 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC006023.1-201ENST00000603944 259 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC073657.2-201ENST00000605661 303 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC015802.5-201ENST00000607478 399 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 BMS1P21-201ENST00000634565 365 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 AC132825.8-201ENST00000640783 297 ntBASIC3.4□□□□□ -1.86
SHROOM3Q8TF72 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.4□□□□□ -1.87
SHROOM3Q8TF72 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms