Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 RNU4-22P-201ENST00000411058 166 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC245052.5-201ENST00000416320 649 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 MTND4P3-201ENST00000417829 541 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AL121878.1-201ENST00000418638 859 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC092685.1-201ENST00000447960 1243 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 WBP1LP4-201ENST00000505043 344 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC026427.2-201ENST00000506228 536 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC104417.1-201ENST00000523974 751 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 OR4A12P-201ENST00000530847 918 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC009097.3-201ENST00000563557 1018 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AF131215.7-201ENST00000602443 707 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC104662.1-201ENST00000604448 511 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC231759.1-201ENST00000616455 597 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC024023.1-201ENST00000624530 922 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 AC032011.1-201ENST00000611703 1549 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 PRO1804-201ENST00000623780 2050 ntBASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLHDC9Q8NEP7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC139713.2-215ENST00000641428 5037 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 RNA5SP27-201ENST00000363839 119 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 RNU4-68P-201ENST00000364314 141 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 Y_RNA.578-201ENST00000390903 88 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 MCTS2P-201ENST00000394552 546 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 DNAJC19P6-201ENST00000401853 280 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 RPL7P4-203ENST00000430239 730 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 PTGES3P1-201ENST00000439531 483 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 RANP8-201ENST00000444720 713 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 OR51B8P-201ENST00000449892 769 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AL133244.1-201ENST00000456007 258 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC008837.1-201ENST00000511513 412 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 RNA5SP164-201ENST00000516533 110 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 OR5B10P-201ENST00000532869 642 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AL109741.3-201ENST00000561748 592 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC006960.3-201ENST00000561845 705 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AL121834.1-201ENST00000572284 509 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 ZNF415P1-201ENST00000582279 1166 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AL049844.2-201ENST00000604280 628 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 OR2BH1P-201ENST00000608850 864 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC123767.1-202ENST00000620407 817 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KLHDC9Q8NEP7 HSPA8P17-201ENST00000427029 1382 ntBASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 SNORD116-12-201ENST00000384468 92 ntBASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 SNORD65C-201ENST00000390962 71 ntBASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 RPL7P60-201ENST00000397636 735 ntBASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.27□□□□□ -1.73
KLHDC9Q8NEP7 HMGB3P31-201ENST00000413333 595 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms