Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-579P-201ENST00000516879 102 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC006077.1-201ENST00000604746 343 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC100814.1-201ENST00000606963 623 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AL355802.4-201ENST00000607635 548 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 MIR8058-201ENST00000615737 89 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AL731566.2-201ENST00000618971 317 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 RNA5SP42-201ENST00000364278 115 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC007066.1-201ENST00000392902 381 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 CCNB2P1-201ENST00000399411 1150 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 RNA5SP498-201ENST00000411342 120 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 CYCSP43-201ENST00000438233 310 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 RNU7-27P-201ENST00000459281 62 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 RPL23AP14-201ENST00000468281 468 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 RPL5P23-201ENST00000496040 868 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 RNU6-362P-201ENST00000516736 90 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AP000926.4-201ENST00000527351 454 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 OR5AP1P-201ENST00000529730 940 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AC055764.2-201ENST00000610089 670 ntBASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC65Q8IXS2 AL592494.2-201ENST00000425455 1548 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC65Q8IXS2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC65Q8IXS2 EI24P2-201ENST00000397776 1076 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 RN7SKP159-201ENST00000410657 292 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC013404.1-201ENST00000413068 249 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 RPS3AP46-201ENST00000448352 682 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 HMGB1P26-201ENST00000452520 628 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC023050.1-201ENST00000498198 304 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC023141.12-201ENST00000512399 199 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 RANP9-201ENST00000519957 271 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 HMGB1P46-201ENST00000520062 610 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AP004242.1-201ENST00000533701 349 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 AL389895.1-201ENST00000554127 252 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC006946.3-201ENST00000609791 756 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
CCDC65Q8IXS2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4□□□□□ -1.77
CCDC65Q8IXS2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 RNA5SP51-201ENST00000364750 119 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 RNU6-185P-201ENST00000384421 107 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 SNORD3H-201ENST00000384486 214 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 U3.39-201ENST00000408569 239 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 RNU4-74P-201ENST00000411280 161 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 SDCBPP2-201ENST00000424643 885 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 RPS3AP50-201ENST00000487064 803 ntBASIC3.99□□□□□ -1.77
CCDC65Q8IXS2 FTH1P24-201ENST00000503502 462 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms