Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 USP24P1-201ENST00000433802 779 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 snoU13.8-201ENST00000458890 104 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 RN7SKP219-201ENST00000516825 296 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 IGHV4-55-201ENST00000520889 368 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 SETP2-201ENST00000553886 926 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 MIR4504-201ENST00000577413 92 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC233702.7-202ENST00000582941 211 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 SUMO2P15-201ENST00000604285 278 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 APOOP1-201ENST00000604695 592 ntBASIC6.59□□□□□ -1.35
RNF135Q8IUD6 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF135Q8IUD6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
RNF135Q8IUD6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF135Q8IUD6 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF135Q8IUD6 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF135Q8IUD6 AC016745.2-201ENST00000608834 3443 ntBASIC6.59□□□□□ -1.36
RNF135Q8IUD6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 SAGE3P-201ENST00000619800 1635 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 OR1S2-201ENST00000302592 978 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 Y_RNA.22-201ENST00000362492 102 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 RN7SKP160-201ENST00000363804 340 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 RNU6-38P-201ENST00000384085 107 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 Y_RNA.625-201ENST00000411256 107 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 CHIAP3-201ENST00000423668 1133 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AL451136.1-201ENST00000435399 325 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 RPS3AP52-201ENST00000435639 297 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 RNU7-152P-201ENST00000458982 64 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 RNU6-333P-201ENST00000459117 107 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 RN7SL283P-201ENST00000489055 303 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AL163153.1-201ENST00000554223 283 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC010653.1-201ENST00000571108 881 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC090615.1-201ENST00000577519 154 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AL512782.1-201ENST00000603093 364 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 NUTF2P8-201ENST00000604593 363 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AL121992.2-201ENST00000606262 256 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC018445.2-201ENST00000622987 260 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 AC130650.2-201ENST00000618736 2403 ntBASIC6.58□□□□□ -1.36
RNF135Q8IUD6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF135Q8IUD6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 SAMMSON-210ENST00000641260 1308 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 RNA5SP346-201ENST00000363541 121 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 RNU6-522P-201ENST00000364497 107 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 RNY3P13-201ENST00000365542 102 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 MIR1203-201ENST00000408812 85 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 RNA5SP345-201ENST00000410646 108 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 RNU6-847P-201ENST00000411115 108 ntBASIC6.57□□□□□ -1.36
RNF135Q8IUD6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF135Q8IUD6 AL035660.1-201ENST00000422041 222 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms