Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 MTND5P27-201ENST00000428871 1720 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 SNORA73.2-201ENST00000364946 201 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AP002088.1-201ENST00000382740 395 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 RPL21P17-201ENST00000397467 475 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 GSTA12P-201ENST00000402398 508 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 ELOCP6-201ENST00000429066 328 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL050321.1-201ENST00000432363 400 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 ARL5AP3-201ENST00000439327 386 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 CBX1P4-201ENST00000439415 457 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL353898.1-201ENST00000444055 238 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL157827.1-201ENST00000447622 132 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 UBDP1-202ENST00000457888 382 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 ELOCP12-201ENST00000458706 328 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 ACTR3P3-201ENST00000480448 893 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AP001086.1-201ENST00000494882 321 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC021146.7-201ENST00000509604 775 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 RNA5SP208-201ENST00000516156 78 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC008489.1-201ENST00000524271 483 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 OR4A2P-201ENST00000527276 913 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 MED28P5-201ENST00000528254 438 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 TRAV37-201ENST00000553906 342 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL049874.4-201ENST00000557593 255 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AC055764.2-201ENST00000610089 670 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 AL356863.1-201ENST00000623378 1080 ntBASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
NIPAL1Q6NVV3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 RNU1-75P-201ENST00000347264 129 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 PTMAP2-201ENST00000397627 327 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC025750.1-201ENST00000399891 379 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC007390.1-201ENST00000415722 356 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 Vault.1-201ENST00000516474 102 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 RNU6-1308P-201ENST00000516817 103 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 KLKP1-201ENST00000595979 403 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 HMGB1P51-201ENST00000605166 638 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 MIR8058-201ENST00000615737 89 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC011472.4-201ENST00000615848 491 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC079684.1-201ENST00000621405 437 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC015726.3-201ENST00000624501 418 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 AC123912.3-201ENST00000600907 1367 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 MFSD8-233ENST00000641482 4860 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 SRP72P2-201ENST00000344851 1979 ntBASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL1Q6NVV3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
NIPAL1Q6NVV3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.85
NIPAL1Q6NVV3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 AL353743.4-201ENST00000422653 1547 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 RNU1-85P-201ENST00000364127 164 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 SNORA62.3-201ENST00000365110 153 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 AL359837.1-201ENST00000381357 287 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 U8.11-201ENST00000384699 133 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 U8.12-201ENST00000384701 133 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 MIR200C-201ENST00000384980 68 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 AC007066.1-201ENST00000392902 381 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 RPL26P37-201ENST00000411983 438 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 RPL31P45-201ENST00000419532 356 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 AL035423.1-201ENST00000420331 213 ntBASIC3.46□□□□□ -1.86
NIPAL1Q6NVV3 AC245054.1-201ENST00000420944 258 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms