Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 AC008745.1-201ENST00000604064 271 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.11□□□□□ -1.91
CCDC58Q4VC31 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC58Q4VC31 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC017071.1-201ENST00000564407 2204 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RNA5SP317-201ENST00000410176 116 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RNA5SP311-201ENST00000411290 116 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RN7SKP53-201ENST00000411337 315 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RPL26P29-201ENST00000415623 438 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AL139247.1-201ENST00000422768 325 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RPL23AP82-202ENST00000427528 469 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RPL21P40-201ENST00000428586 483 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 BRWD1P3-201ENST00000428816 390 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AL133162.1-201ENST00000463228 453 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RN7SL459P-201ENST00000481078 302 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AL139099.1-201ENST00000497398 403 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RNA5SP315-201ENST00000516340 116 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RN7SKP82-201ENST00000516786 223 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RNA5SP312-201ENST00000517068 116 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC239860.2-201ENST00000525886 270 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 MED28P5-201ENST00000528254 438 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC112503.1-201ENST00000608436 391 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC005962.2-201ENST00000611427 652 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AC084035.1-201ENST00000634543 607 ntBASIC3.1□□□□□ -1.91
CCDC58Q4VC31 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC58Q4VC31 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL121657.1-201ENST00000327215 531 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL445189.1-201ENST00000405722 338 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 YWHAZP7-201ENST00000436906 631 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 RPL21P2-201ENST00000440049 481 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC006326.1-201ENST00000445465 787 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 HMGN2P16-201ENST00000456802 261 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 RPL23AP12-201ENST00000467573 473 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 RPL31P13-201ENST00000484151 370 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC108064.1-201ENST00000513791 460 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 PTP4A1P6-201ENST00000531034 478 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL157394.1-201ENST00000562983 1224 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC087499.8-201ENST00000578406 226 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC104785.1-201ENST00000603220 588 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 YWHAQP7-201ENST00000603536 658 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL627309.6-201ENST00000606857 840 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 MLECP1-201ENST00000615893 709 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AL136164.4-201ENST00000625013 2135 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 MIR7641-1-201ENST00000627518 61 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
CCDC58Q4VC31 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.92
CCDC58Q4VC31 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CCDC58Q4VC31 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms