Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 C2orf27A-204ENST00000623058 969 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AP000542.2-201ENST00000623199 6179 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 RNU6-1066P-201ENST00000363573 105 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 RNU5A-2P-201ENST00000384337 116 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 SNORD116-23-201ENST00000384645 92 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 IFNNP1-201ENST00000429219 553 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 GTF2IP7-202ENST00000436677 309 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 MTND5P2-201ENST00000442927 1142 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 MTND1P29-201ENST00000448112 647 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 VPS26AP1-201ENST00000483197 979 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 Vault.1-201ENST00000516474 102 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AP005136.1-201ENST00000579765 429 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 MIR6758-201ENST00000620653 63 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC098679.5-201ENST00000624394 571 ntBASIC5.29□□□□□ -1.56
LONRF3Q496Y0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LONRF3Q496Y0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL442639.1-201ENST00000625030 1899 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 XIAPP3-201ENST00000312918 795 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL136133.1-201ENST00000413694 376 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL365203.2-201ENST00000423444 196 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 Z74021.1-201ENST00000423610 407 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 MTND4P20-201ENST00000424125 869 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL732292.1-201ENST00000426692 226 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 DNAJC19P7-201ENST00000428811 344 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC016712.1-201ENST00000431088 378 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 SEPT7P5-201ENST00000434048 306 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 GSTA7P-201ENST00000438425 448 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 COX6CP18-201ENST00000448769 222 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 RPS5P7-201ENST00000456664 608 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AP000893.1-201ENST00000474462 794 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 RPS3AP43-201ENST00000479743 781 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC011005.3-201ENST00000491624 395 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 AC005726.1-201ENST00000494679 427 ntBASIC5.28□□□□□ -1.56
LONRF3Q496Y0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms