Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC011742.2-201ENST00000443818 352 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC016027.4-201ENST00000450866 277 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 GSTA11P-201ENST00000452866 669 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 SNORD127-201ENST00000458892 86 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RPL21P99-201ENST00000480369 423 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RPS21P4-201ENST00000487122 248 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MTND1P19-201ENST00000511780 315 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RNU6-1308P-201ENST00000516817 103 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.703-201ENST00000516846 111 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RNU6-273P-201ENST00000516937 96 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC022360.1-201ENST00000521058 340 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 PLCE1P1-201ENST00000622094 305 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL359091.1-201ENST00000449048 1734 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL049634.1-201ENST00000453770 1720 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC011755.1-201ENST00000623763 2049 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MAPK10-344ENST00000641718 3746 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 OR11H5P-202ENST00000641612 1325 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AL731566.1-201ENST00000620490 1937 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AL672167.2-201ENST00000377164 879 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 SAR1AP2-201ENST00000392696 594 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 TMSB4XP8-201ENST00000402089 135 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AL139397.2-201ENST00000404529 772 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 TMSB4XP6-201ENST00000415187 135 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 TMSB4XP1-201ENST00000424567 135 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 RPL23AP30-201ENST00000432419 501 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 GPR143P-201ENST00000434155 205 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC098831.1-201ENST00000440661 216 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 OR1H1P-201ENST00000448731 937 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 BX248409.1-201ENST00000455497 255 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 RNU7-66P-201ENST00000459469 62 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 RN7SL346P-201ENST00000491561 294 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC083795.1-201ENST00000491760 320 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 RNU6-885P-201ENST00000516607 104 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC022616.6-201ENST00000520479 119 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AP001922.4-201ENST00000526967 290 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AP005435.4-201ENST00000529514 284 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AP003385.6-201ENST00000531603 374 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 MIR4790-201ENST00000577799 79 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC078899.3-201ENST00000599065 212 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC011468.4-201ENST00000603942 409 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AP003789.1-201ENST00000617737 605 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AL132640.3-201ENST00000630473 177 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC022905.1-201ENST00000503430 3048 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AC005592.1-201ENST00000566527 1640 ntBASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RSPO4Q2I0M5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms