Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Y_RNA.145-201ENST00000363527 102 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 U3.7-201ENST00000363668 216 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 RNU6-463P-201ENST00000384340 107 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 SNORA70.9-201ENST00000384370 135 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 RNU6-1151P-201ENST00000384684 107 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 RNU6-1158P-201ENST00000391167 107 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX4Q06945 RPL32P23-201ENST00000397237 405 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX4Q06945 MTND3P8-201ENST00000412909 339 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.91□□□□□ -1.46
SOX4Q06945 SRSF1P1-201ENST00000424058 520 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX4Q06945 AL590399.4-201ENST00000436561 601 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 RSU1P2-202ENST00000437884 485 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC016691.1-201ENST00000441321 413 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX4Q06945 AC105399.1-202ENST00000447303 205 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AL136380.1-201ENST00000447970 162 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AL161747.1-201ENST00000480068 358 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX4Q06945 SNORA40.12-201ENST00000516329 111 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX4Q06945 AC068714.1-201ENST00000559623 800 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC099489.2-201ENST00000574976 260 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX4Q06945 AC008737.2-201ENST00000599446 118 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC115621.1-201ENST00000604653 858 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AL512329.2-201ENST00000607350 548 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 MIR7973-1-201ENST00000614683 76 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC233309.1-201ENST00000619522 751 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 AC009161.2-201ENST00000624626 138 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SOX4Q06945 C4BPAP1-201ENST00000415474 1893 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 AC109780.1-201ENST00000451768 1344 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC025125.1-201ENST00000624743 1922 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX4Q06945 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX4Q06945 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX4Q06945 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SOX4Q06945 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SOX4Q06945 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 RNU6-1120P-201ENST00000362988 108 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 Y_RNA.202-201ENST00000364083 110 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 U3.10-201ENST00000364459 214 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 RNU6-474P-201ENST00000384243 107 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SOX4Q06945 RNU6-907P-201ENST00000390924 102 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 RNA5SP339-201ENST00000390987 122 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 RPL7P25-201ENST00000404151 721 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AL133388.1-201ENST00000404509 287 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 SNORA11B-201ENST00000408175 129 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX4Q06945 LYPLA1P1-201ENST00000434514 622 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 IFNA20P-201ENST00000436840 528 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 H3F3BP1-201ENST00000440551 403 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 BNIP3P2-201ENST00000441221 577 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AZGP1P2-201ENST00000454506 345 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AL035090.1-201ENST00000454835 332 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 RNU7-136P-201ENST00000458819 69 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 SNORD19B-201ENST00000459623 84 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 OR2AO1P-201ENST00000476497 403 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 ATP5LP5-201ENST00000483050 299 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX4Q06945 RNU6-1170P-201ENST00000515974 106 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 BTF3P12-201ENST00000519620 469 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX4Q06945 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX4Q06945 AC122688.1-201ENST00000541494 223 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 PDCD5P1-201ENST00000543528 309 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX4Q06945 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.9□□□□□ -1.46
SOX4Q06945 AC022884.3-201ENST00000579571 248 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX4Q06945 MIR3668-201ENST00000582138 75 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX4Q06945 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AC136443.5-201ENST00000603741 370 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX4Q06945 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX4Q06945 AC093913.1-201ENST00000614178 329 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX4Q06945 AC009237.17-201ENST00000618111 748 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 AL356585.4-201ENST00000623078 1229 ntBASIC5.9□□□□□ -1.46
SOX4Q06945 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SOX4Q06945 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.46
SOX4Q06945 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SOX4Q06945 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SOX4Q06945 AL121950.1-201ENST00000624993 2077 ntBASIC5.9□□□□□ -1.47
SOX4Q06945 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms