Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC073648.5-201ENST00000603502 305 ntBASIC4.24□□□□□ -1.73
LTBQ06643 AC018714.1-201ENST00000605028 208 ntBASIC4.24□□□□□ -1.73
LTBQ06643 COX6CP4-201ENST00000605798 228 ntBASIC4.24□□□□□ -1.73
LTBQ06643 AC131235.4-201ENST00000609288 620 ntBASIC4.24□□□□□ -1.73
LTBQ06643 AC011472.4-201ENST00000615848 491 ntBASIC4.24□□□□□ -1.73
LTBQ06643 AP001005.3-201ENST00000622049 129 ntBASIC4.24□□□□□ -1.73
LTBQ06643 AC034229.5-201ENST00000624258 185 ntBASIC4.24□□□□□ -1.73
LTBQ06643 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LTBQ06643 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LTBQ06643 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LTBQ06643 MAPK10-349ENST00000641767 3661 ntBASIC4.24□□□□□ -1.73
LTBQ06643 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LTBQ06643 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 ZFRP1-201ENST00000457579 2970 ntBASIC4.23□□□□□ -1.73
LTBQ06643 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LTBQ06643 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LTBQ06643 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 MTND5P24-201ENST00000438892 1767 ntBASIC4.23□□□□□ -1.73
LTBQ06643 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 RNU6-931P-201ENST00000363850 107 ntBASIC4.23□□□□□ -1.73
LTBQ06643 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LTBQ06643 Y_RNA.408-201ENST00000383987 102 ntBASIC4.23□□□□□ -1.73
LTBQ06643 RNU6-98P-201ENST00000384173 107 ntBASIC4.23□□□□□ -1.73
LTBQ06643 MIR525-201ENST00000384978 85 ntBASIC4.23□□□□□ -1.73
LTBQ06643 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 VDAC2P1-201ENST00000399358 958 ntBASIC4.23□□□□□ -1.73
LTBQ06643 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 AL022400.1-201ENST00000423946 935 ntBASIC4.23□□□□□ -1.73
LTBQ06643 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 NRBF2P3-201ENST00000432731 865 ntBASIC4.23□□□□□ -1.73
LTBQ06643 MTND1P1-201ENST00000445453 368 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AL359073.1-201ENST00000448036 403 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AC108463.1-201ENST00000450258 347 ntBASIC4.23□□□□□ -1.73
LTBQ06643 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.23□□□□□ -1.73
LTBQ06643 snoU13.22-201ENST00000459428 104 ntBASIC4.23□□□□□ -1.73
LTBQ06643 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 AC013356.1-201ENST00000489027 564 ntBASIC4.23□□□□□ -1.73
LTBQ06643 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 AC079395.1-201ENST00000510981 262 ntBASIC4.23□□□□□ -1.73
LTBQ06643 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.23□□□□□ -1.73
LTBQ06643 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 HNRNPKP5-201ENST00000515300 253 ntBASIC4.23□□□□□ -1.73
LTBQ06643 RNU6-416P-201ENST00000516265 103 ntBASIC4.23□□□□□ -1.73
LTBQ06643 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 MED28P5-201ENST00000528254 438 ntBASIC4.23□□□□□ -1.73
LTBQ06643 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.23□□□□□ -1.73
LTBQ06643 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 AC105129.1-201ENST00000560250 297 ntBASIC4.23□□□□□ -1.73
LTBQ06643 SULT1C2P2-201ENST00000562517 294 ntBASIC4.23□□□□□ -1.73
LTBQ06643 ROCK1P1-201ENST00000573767 549 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 MTATP6P3-201ENST00000581686 676 ntBASIC4.23□□□□□ -1.73
LTBQ06643 KPNA2P3-201ENST00000584190 848 ntBASIC4.23□□□□□ -1.73
LTBQ06643 MIR3611-201ENST00000584484 83 ntBASIC4.23□□□□□ -1.73
LTBQ06643 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.23□□□□□ -1.73
LTBQ06643 VN1R88P-201ENST00000596787 292 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AC103881.1-201ENST00000603476 538 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AL356218.2-201ENST00000605264 187 ntBASIC4.23□□□□□ -1.73
LTBQ06643 MIR6716-201ENST00000613413 80 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AC023158.2-201ENST00000614876 543 ntBASIC4.23□□□□□ -1.73
LTBQ06643 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AL121873.1-201ENST00000616013 524 ntBASIC4.23□□□□□ -1.73
LTBQ06643 AC009878.1-201ENST00000621819 340 ntBASIC4.23□□□□□ -1.73
LTBQ06643 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
LTBQ06643 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.23□□□□□ -1.73
LTBQ06643 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LTBQ06643 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 DCAF13P3-201ENST00000561147 1334 ntBASIC4.22□□□□□ -1.73
LTBQ06643 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LTBQ06643 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 Y_RNA.3-201ENST00000362331 103 ntBASIC4.22□□□□□ -1.73
LTBQ06643 RNU6-666P-201ENST00000363499 107 ntBASIC4.22□□□□□ -1.73
LTBQ06643 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LTBQ06643 RNU6-517P-201ENST00000384362 110 ntBASIC4.22□□□□□ -1.73
LTBQ06643 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.22□□□□□ -1.73
LTBQ06643 SNORA11.2-201ENST00000408318 127 ntBASIC4.22□□□□□ -1.73
LTBQ06643 RNU4-25P-201ENST00000410569 230 ntBASIC4.22□□□□□ -1.73
LTBQ06643 CEACAMP8-201ENST00000413902 580 ntBASIC4.22□□□□□ -1.73
LTBQ06643 RAD23BP2-201ENST00000416003 1207 ntBASIC4.22□□□□□ -1.73
LTBQ06643 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.22□□□□□ -1.73
LTBQ06643 MTCO2P34-201ENST00000421994 607 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms