Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.21□□□□□ -1.74
CCNA1P78396 CENPUP2-201ENST00000555897 1186 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 AC090877.1-201ENST00000561418 344 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 VN1R92P-201ENST00000598511 928 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.21□□□□□ -1.74
CCNA1P78396 AC022387.2-201ENST00000604050 448 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.21□□□□□ -1.74
CCNA1P78396 U6.48-201ENST00000618523 106 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 AC069209.1-201ENST00000619282 651 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.21□□□□□ -1.74
CCNA1P78396 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.21□□□□□ -1.74
CCNA1P78396 NMD3P1-201ENST00000439704 1488 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 AC007823.1-201ENST00000569932 1566 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCNA1P78396 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 AC093908.1-201ENST00000623125 8092 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCNA1P78396 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 UBE3AP2-201ENST00000429033 2259 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNA1P78396 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNA1P78396 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 RNU6-356P-201ENST00000384140 107 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 NDUFB4P4-201ENST00000404822 243 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 SNORA11C-201ENST00000408532 129 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 RAC1P3-201ENST00000416129 580 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 HIGD1AP12-201ENST00000427832 281 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 CYCSP32-201ENST00000440548 321 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 BX510359.1-201ENST00000456973 237 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 RPL21P10-201ENST00000463521 490 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 RN7SL807P-201ENST00000470923 297 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 SUMO1P1-201ENST00000497904 306 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC011611.1-201ENST00000552179 197 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.2□□□□□ -1.74
CCNA1P78396 AC022079.2-201ENST00000619739 566 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 AC079684.1-201ENST00000621405 437 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 MIR3651-201ENST00000630427 90 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.2□□□□□ -1.74
CCNA1P78396 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCNA1P78396 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.2□□□□□ -1.74
CCNA1P78396 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNA1P78396 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNA1P78396 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNA1P78396 AC097504.1-201ENST00000515103 2415 ntBASIC4.2□□□□□ -1.74
CCNA1P78396 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCNA1P78396 RNU1-33P-201ENST00000364249 162 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 MIR1183-201ENST00000408856 89 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 RNA5SP39-201ENST00000411245 120 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AC004987.3-201ENST00000413879 771 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AL353748.1-201ENST00000440753 474 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNA1P78396 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 RBMY2UP-201ENST00000453474 324 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 AC104687.1-201ENST00000485829 412 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNA1P78396 AC023141.12-201ENST00000512399 199 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNA1P78396 RNA5SP208-201ENST00000516156 78 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNA1P78396 IGLVIV-53-201ENST00000520107 367 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.19□□□□□ -1.74
CCNA1P78396 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 OR4C2P-201ENST00000530855 1064 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNA1P78396 GTF2IP8-201ENST00000560687 584 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AF131215.7-201ENST00000602443 707 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNA1P78396 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNA1P78396 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNA1P78396 AP004607.9-201ENST00000618202 316 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 AC018816.2-201ENST00000621460 353 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNA1P78396 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNA1P78396 GTF2H2B-203ENST00000508065 1432 ntBASIC4.19□□□□□ -1.74
CCNA1P78396 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.19□□□□□ -1.74
CCNA1P78396 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms