Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR2116-201ENST00000517221 80 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM4P67936 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
TPM4P67936 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM4P67936 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM4P67936 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM4P67936 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.81□□□□□ -1.8
TPM4P67936 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AC010615.3-201ENST00000597319 394 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AC090912.3-201ENST00000609775 533 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AP005212.4-201ENST00000614206 710 ntBASIC3.81□□□□□ -1.8
TPM4P67936 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
TPM4P67936 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM4P67936 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM4P67936 AC010435.1-201ENST00000623353 1177 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.81□□□□□ -1.8
TPM4P67936 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TPM4P67936 AC090337.1-201ENST00000579651 2074 ntBASIC3.81□□□□□ -1.8
TPM4P67936 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TPM4P67936 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM4P67936 ZNF33CP-201ENST00000432492 2030 ntBASIC3.8□□□□□ -1.8
TPM4P67936 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM4P67936 RNU6-618P-201ENST00000363518 112 ntBASIC3.8□□□□□ -1.8
TPM4P67936 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM4P67936 OR4F13P-201ENST00000428478 931 ntBASIC3.8□□□□□ -1.8
TPM4P67936 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 AL031663.1-201ENST00000437445 219 ntBASIC3.8□□□□□ -1.8
TPM4P67936 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC009969.1-201ENST00000438726 172 ntBASIC3.8□□□□□ -1.8
TPM4P67936 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 RPL37P6-202ENST00000464216 403 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC091564.1-201ENST00000464563 479 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM4P67936 AC034244.2-201ENST00000514668 858 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 OR5D17P-201ENST00000531492 978 ntBASIC3.8□□□□□ -1.8
TPM4P67936 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM4P67936 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.8□□□□□ -1.8
TPM4P67936 AC053481.4-201ENST00000583164 216 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM4P67936 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM4P67936 AC006116.10-201ENST00000591836 581 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC006338.2-201ENST00000616864 791 ntBASIC3.8□□□□□ -1.8
TPM4P67936 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.8□□□□□ -1.8
TPM4P67936 AC015726.3-201ENST00000624501 418 ntBASIC3.8□□□□□ -1.8
TPM4P67936 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.8□□□□□ -1.8
TPM4P67936 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TPM4P67936 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TPM4P67936 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TPM4P67936 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 AL359715.4-201ENST00000606629 1436 ntBASIC3.79□□□□□ -1.8
TPM4P67936 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM4P67936 RNA5SP283-201ENST00000365604 119 ntBASIC3.79□□□□□ -1.8
TPM4P67936 RPL32P35-201ENST00000415214 394 ntBASIC3.79□□□□□ -1.8
TPM4P67936 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM4P67936 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.79□□□□□ -1.8
TPM4P67936 RRM2P4-201ENST00000441721 562 ntBASIC3.79□□□□□ -1.8
TPM4P67936 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM4P67936 MTND2P8-201ENST00000450555 1025 ntBASIC3.79□□□□□ -1.8
TPM4P67936 VN1R105P-201ENST00000486595 910 ntBASIC3.79□□□□□ -1.8
TPM4P67936 AC078918.1-201ENST00000498515 228 ntBASIC3.79□□□□□ -1.8
TPM4P67936 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
TPM4P67936 AC005921.1-201ENST00000510589 286 ntBASIC3.79□□□□□ -1.8
TPM4P67936 AC026402.1-201ENST00000513642 170 ntBASIC3.79□□□□□ -1.8
TPM4P67936 CDH12P4-201ENST00000517835 295 ntBASIC3.79□□□□□ -1.8
TPM4P67936 CDH12P3-201ENST00000517935 295 ntBASIC3.79□□□□□ -1.8
TPM4P67936 CDH12P1-201ENST00000518435 295 ntBASIC3.79□□□□□ -1.8
TPM4P67936 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM4P67936 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM4P67936 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM4P67936 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM4P67936 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.79□□□□□ -1.8
TPM4P67936 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.79□□□□□ -1.8
TPM4P67936 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM4P67936 MIR7851-201ENST00000610611 160 ntBASIC3.79□□□□□ -1.8
TPM4P67936 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 AC007342.8-201ENST00000623278 678 ntBASIC3.79□□□□□ -1.8
TPM4P67936 SNORA50A-202ENST00000629536 136 ntBASIC3.79□□□□□ -1.8
TPM4P67936 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.79□□□□□ -1.8
TPM4P67936 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TPM4P67936 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.78□□□□□ -1.8
TPM4P67936 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM4P67936 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TPM4P67936 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TPM4P67936 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.78□□□□□ -1.8
TPM4P67936 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TPM4P67936 RPL7P26-201ENST00000333817 754 ntBASIC3.78□□□□□ -1.8
TPM4P67936 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.78□□□□□ -1.8
TPM4P67936 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.78□□□□□ -1.8
TPM4P67936 AC007899.1-201ENST00000412776 775 ntBASIC3.78□□□□□ -1.8
TPM4P67936 AC007390.1-201ENST00000415722 356 ntBASIC3.78□□□□□ -1.8
TPM4P67936 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms