Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORA70.2-201ENST00000364506 135 ntBASIC2.1□□□□□ -2.07
RPL39P62891 MIR181A2-201ENST00000384863 110 ntBASIC2.1□□□□□ -2.07
RPL39P62891 RNA5SP129-201ENST00000410276 118 ntBASIC2.1□□□□□ -2.07
RPL39P62891 RNU2-6P-201ENST00000411404 190 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.1□□□□□ -2.07
RPL39P62891 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 AL138787.1-202ENST00000437804 898 ntBASIC2.1□□□□□ -2.07
RPL39P62891 RPS29P6-201ENST00000438196 145 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AL592437.1-201ENST00000443781 492 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AC009220.1-201ENST00000451614 275 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.1□□□□□ -2.07
RPL39P62891 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.1□□□□□ -2.07
RPL39P62891 RPL23AP62-201ENST00000463396 453 ntBASIC2.1□□□□□ -2.07
RPL39P62891 RPS29P2-201ENST00000479278 136 ntBASIC2.1□□□□□ -2.07
RPL39P62891 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 AC010265.1-201ENST00000513509 211 ntBASIC2.1□□□□□ -2.07
RPL39P62891 HMGN1P15-201ENST00000513870 295 ntBASIC2.1□□□□□ -2.07
RPL39P62891 MTND4LP31-201ENST00000514859 294 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.1□□□□□ -2.07
RPL39P62891 IGKV2D-10-201ENST00000520194 281 ntBASIC2.1□□□□□ -2.07
RPL39P62891 IGHV3-76-201ENST00000522465 295 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AP001207.1-201ENST00000524051 481 ntBASIC2.1□□□□□ -2.07
RPL39P62891 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
RPL39P62891 AC087888.1-201ENST00000550884 1254 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.1□□□□□ -2.07
RPL39P62891 MIR3922-201ENST00000585192 84 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AC023043.3-201ENST00000593113 385 ntBASIC2.1□□□□□ -2.07
RPL39P62891 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.1□□□□□ -2.07
RPL39P62891 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.1□□□□□ -2.07
RPL39P62891 AC112230.1-201ENST00000604342 547 ntBASIC2.1□□□□□ -2.07
RPL39P62891 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.1□□□□□ -2.07
RPL39P62891 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.1□□□□□ -2.07
RPL39P62891 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.1□□□□□ -2.07
RPL39P62891 AC073348.1-201ENST00000623002 331 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AC099506.2-201ENST00000623074 221 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AP003499.2-201ENST00000624100 483 ntBASIC2.1□□□□□ -2.07
RPL39P62891 AC009039.2-201ENST00000624524 529 ntBASIC2.1□□□□□ -2.07
RPL39P62891 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.1□□□□□ -2.07
RPL39P62891 U6.98-201ENST00000637157 84 ntBASIC2.1□□□□□ -2.07
RPL39P62891 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RPL39P62891 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RPL39P62891 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RPL39P62891 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPL39P62891 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
RPL39P62891 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RPL39P62891 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPL39P62891 RNA5SP50-201ENST00000363731 107 ntBASIC2.09□□□□□ -2.07
RPL39P62891 OR6K3-202ENST00000368146 996 ntBASIC2.09□□□□□ -2.07
RPL39P62891 MIR141-201ENST00000384975 95 ntBASIC2.09□□□□□ -2.07
RPL39P62891 RPL7P25-201ENST00000404151 721 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AL590004.2-201ENST00000404787 371 ntBASIC2.09□□□□□ -2.07
RPL39P62891 U3.42-201ENST00000408746 214 ntBASIC2.09□□□□□ -2.07
RPL39P62891 CYCSP19-201ENST00000411715 316 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AL138785.1-201ENST00000425821 331 ntBASIC2.09□□□□□ -2.07
RPL39P62891 MTCO1P51-201ENST00000427672 1060 ntBASIC2.09□□□□□ -2.07
RPL39P62891 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.09□□□□□ -2.07
RPL39P62891 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.09□□□□□ -2.07
RPL39P62891 YWHAZP7-201ENST00000436906 631 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AC016696.1-201ENST00000446949 318 ntBASIC2.09□□□□□ -2.07
RPL39P62891 CCRL1P1-201ENST00000449542 1053 ntBASIC2.09□□□□□ -2.07
RPL39P62891 NUTF2P7-201ENST00000453086 375 ntBASIC2.09□□□□□ -2.07
RPL39P62891 METTL15P1-201ENST00000481421 1045 ntBASIC2.09□□□□□ -2.07
RPL39P62891 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPL39P62891 KCTD9P6-201ENST00000522306 950 ntBASIC2.09□□□□□ -2.07
RPL39P62891 HIGD1AP10-201ENST00000527837 282 ntBASIC2.09□□□□□ -2.07
RPL39P62891 OR8I1P-201ENST00000529291 931 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AC007458.1-201ENST00000542812 373 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.09□□□□□ -2.07
RPL39P62891 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.09□□□□□ -2.07
RPL39P62891 AC122134.1-201ENST00000565664 1104 ntBASIC2.09□□□□□ -2.07
RPL39P62891 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.09□□□□□ -2.07
RPL39P62891 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.09□□□□□ -2.07
RPL39P62891 AL031985.2-201ENST00000600955 480 ntBASIC2.09□□□□□ -2.07
RPL39P62891 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.09□□□□□ -2.07
RPL39P62891 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AL355365.1-201ENST00000616480 294 ntBASIC2.09□□□□□ -2.07
RPL39P62891 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.09□□□□□ -2.07
RPL39P62891 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.09□□□□□ -2.07
RPL39P62891 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.09□□□□□ -2.08
RPL39P62891 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.09□□□□□ -2.08
RPL39P62891 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPL39P62891 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.08□□□□□ -2.08
RPL39P62891 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPL39P62891 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RPL39P62891 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RPL39P62891 RNU1-35P-201ENST00000362782 153 ntBASIC2.08□□□□□ -2.08
RPL39P62891 RN7SKP280-201ENST00000364196 304 ntBASIC2.08□□□□□ -2.08
RPL39P62891 AL357075.1-201ENST00000404107 726 ntBASIC2.08□□□□□ -2.08
RPL39P62891 RN7SKP159-201ENST00000410657 292 ntBASIC2.08□□□□□ -2.08
RPL39P62891 RNU2-22P-201ENST00000411266 212 ntBASIC2.08□□□□□ -2.08
RPL39P62891 RAB9AP3-201ENST00000412737 573 ntBASIC2.08□□□□□ -2.08
RPL39P62891 RPS29P4-201ENST00000414733 161 ntBASIC2.08□□□□□ -2.08
RPL39P62891 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.08□□□□□ -2.08
RPL39P62891 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.08□□□□□ -2.08
RPL39P62891 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.08□□□□□ -2.08
RPL39P62891 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms