Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VSX2P58304 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VSX2P58304 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VSX2P58304 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
VSX2P58304 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.5□□□□□ -1.85
VSX2P58304 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.5□□□□□ -1.85
VSX2P58304 AC009501.3-201ENST00000605001 1352 ntBASIC3.5□□□□□ -1.85
VSX2P58304 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX2P58304 RNU1-87P-201ENST00000363727 170 ntBASIC3.49□□□□□ -1.85
VSX2P58304 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.49□□□□□ -1.85
VSX2P58304 HSPE1P8-201ENST00000406997 288 ntBASIC3.49□□□□□ -1.85
VSX2P58304 RPL30P2-201ENST00000414021 291 ntBASIC3.49□□□□□ -1.85
VSX2P58304 AC245054.1-201ENST00000420944 258 ntBASIC3.49□□□□□ -1.85
VSX2P58304 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 MTND2P8-201ENST00000450555 1025 ntBASIC3.49□□□□□ -1.85
VSX2P58304 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 MTCO3P16-201ENST00000454456 754 ntBASIC3.49□□□□□ -1.85
VSX2P58304 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 AC010307.1-201ENST00000467206 836 ntBASIC3.49□□□□□ -1.85
VSX2P58304 RPL7P47-201ENST00000497299 556 ntBASIC3.49□□□□□ -1.85
VSX2P58304 AC025459.1-201ENST00000504072 156 ntBASIC3.49□□□□□ -1.85
VSX2P58304 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.49□□□□□ -1.85
VSX2P58304 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.49□□□□□ -1.85
VSX2P58304 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX2P58304 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX2P58304 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.49□□□□□ -1.85
VSX2P58304 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.49□□□□□ -1.85
VSX2P58304 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 SNORA51-201ENST00000606420 132 ntBASIC3.49□□□□□ -1.85
VSX2P58304 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX2P58304 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
VSX2P58304 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.49□□□□□ -1.85
VSX2P58304 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VSX2P58304 AL353746.1-201ENST00000566293 6881 ntBASIC3.48□□□□□ -1.85
VSX2P58304 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX2P58304 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX2P58304 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX2P58304 SNORA71.3-201ENST00000362582 128 ntBASIC3.48□□□□□ -1.85
VSX2P58304 CCNB2P1-201ENST00000399411 1150 ntBASIC3.48□□□□□ -1.85
VSX2P58304 ATP5A1P2-201ENST00000412323 255 ntBASIC3.48□□□□□ -1.85
VSX2P58304 RPS20P25-201ENST00000412447 352 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.48□□□□□ -1.85
VSX2P58304 SYF2P2-201ENST00000417620 583 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC069157.1-201ENST00000421749 137 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC091286.1-201ENST00000431233 461 ntBASIC3.48□□□□□ -1.85
VSX2P58304 NDUFB1P1-201ENST00000435191 180 ntBASIC3.48□□□□□ -1.85
VSX2P58304 HSPD1P21-201ENST00000436541 245 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX2P58304 RPL34P26-201ENST00000445636 354 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC099563.1-201ENST00000456086 418 ntBASIC3.48□□□□□ -1.85
VSX2P58304 RPL9P32-201ENST00000464118 620 ntBASIC3.48□□□□□ -1.85
VSX2P58304 RPL7L1P8-201ENST00000469911 741 ntBASIC3.48□□□□□ -1.85
VSX2P58304 HMGB3P14-201ENST00000494195 599 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.48□□□□□ -1.85
VSX2P58304 AC026403.1-201ENST00000518938 295 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX2P58304 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.48□□□□□ -1.85
VSX2P58304 OR8I1P-201ENST00000529291 931 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.48□□□□□ -1.85
VSX2P58304 AL049870.4-201ENST00000555741 486 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AL121594.4-201ENST00000556211 1196 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX2P58304 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX2P58304 ZNF92P3-201ENST00000596594 954 ntBASIC3.48□□□□□ -1.85
VSX2P58304 AC010591.1-201ENST00000603941 649 ntBASIC3.48□□□□□ -1.85
VSX2P58304 KATNBL1P1-201ENST00000605192 748 ntBASIC3.48□□□□□ -1.85
VSX2P58304 MIR7973-1-201ENST00000614683 76 ntBASIC3.48□□□□□ -1.85
VSX2P58304 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX2P58304 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX2P58304 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX2P58304 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.48□□□□□ -1.85
VSX2P58304 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VSX2P58304 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VSX2P58304 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VSX2P58304 AC007823.1-201ENST00000569932 1566 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AC090337.1-201ENST00000579651 2074 ntBASIC3.47□□□□□ -1.85
VSX2P58304 CR381670.1-201ENST00000624291 1693 ntBASIC3.47□□□□□ -1.85
VSX2P58304 OTUD4P1-201ENST00000237841 3067 ntBASIC3.47□□□□□ -1.85
VSX2P58304 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VSX2P58304 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VSX2P58304 OR5T3-201ENST00000303059 1023 ntBASIC3.47□□□□□ -1.85
VSX2P58304 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VSX2P58304 ATP5F1P4-201ENST00000397288 746 ntBASIC3.47□□□□□ -1.85
VSX2P58304 RNA5SP44-201ENST00000410446 133 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.47□□□□□ -1.85
VSX2P58304 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms