Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLDN20P56880 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CLDN20P56880 CCDC75P1-201ENST00000469247 791 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 NDUFA5P9-201ENST00000472609 340 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 RPL7P18-201ENST00000478965 734 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 RPS3AP22-201ENST00000488297 769 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN20P56880 AC010486.2-201ENST00000505572 483 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN20P56880 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 AC010587.2-201ENST00000511727 448 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 AC015795.1-201ENST00000513669 327 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 RNU6-1129P-201ENST00000515964 104 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 RAB9BP1-201ENST00000519581 626 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN20P56880 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.09□□□□□ -1.75
CLDN20P56880 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 OSBPL9P5-201ENST00000542581 171 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.09□□□□□ -1.75
CLDN20P56880 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.09□□□□□ -1.75
CLDN20P56880 AC002400.1-201ENST00000569310 726 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 MIR4716-201ENST00000579628 84 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.09□□□□□ -1.75
CLDN20P56880 HMGB2P1-201ENST00000591146 634 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.09□□□□□ -1.75
CLDN20P56880 VN1R82P-201ENST00000601481 356 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 AC068790.5-201ENST00000602741 355 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 AC133552.5-201ENST00000604266 540 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.09□□□□□ -1.75
CLDN20P56880 MIR7641-1-201ENST00000627518 61 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 CU459211.1-201ENST00000635667 749 ntBASIC4.09□□□□□ -1.75
CLDN20P56880 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN20P56880 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN20P56880 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CLDN20P56880 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.09□□□□□ -1.76
CLDN20P56880 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN20P56880 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.09□□□□□ -1.76
CLDN20P56880 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CLDN20P56880 ASNSP1-201ENST00000518311 1939 ntBASIC4.09□□□□□ -1.76
CLDN20P56880 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN20P56880 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.09□□□□□ -1.76
CLDN20P56880 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLDN20P56880 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN20P56880 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CLDN20P56880 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 AC067945.1-201ENST00000342609 618 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 RNA5SP391-201ENST00000363456 119 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AC019155.1-201ENST00000382242 574 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 Y_RNA.408-201ENST00000383987 102 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 RNU5A-2P-201ENST00000384337 116 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 IQCB2P-201ENST00000401788 1633 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AL078604.1-201ENST00000404609 466 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AL356131.1-201ENST00000405826 414 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 AC073136.2-201ENST00000417282 849 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AC092634.6-201ENST00000418558 192 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN20P56880 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 RPS27AP7-201ENST00000422792 455 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC009480.2-201ENST00000422916 432 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN20P56880 B3GNT2P1-201ENST00000434960 952 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 HLA-N-201ENST00000437516 135 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.08□□□□□ -1.76
CLDN20P56880 HMGB3P9-201ENST00000441799 583 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC009220.1-201ENST00000451614 275 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 RPL21P126-201ENST00000470049 478 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 RPL23AP2-201ENST00000471227 466 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AC090013.1-201ENST00000485147 480 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC107982.1-201ENST00000507171 1300 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 RNU6-1261P-201ENST00000517194 104 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AC027309.2-201ENST00000520566 192 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 IFITM8P-201ENST00000522529 394 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 ARL2BPP5-201ENST00000523141 481 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC007834.2-201ENST00000536310 343 ntBASIC4.08□□□□□ -1.76
CLDN20P56880 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN20P56880 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN20P56880 EIF5A2P1-201ENST00000564027 460 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms