Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORD116-23-201ENST00000384645 92 ntBASIC3.97□□□□□ -1.77
CDH11P55287 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH11P55287 U3.22-201ENST00000391120 215 ntBASIC3.97□□□□□ -1.77
CDH11P55287 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 RPS20P14-201ENST00000412545 360 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 AC004552.1-201ENST00000419089 348 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH11P55287 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 RPEP2-201ENST00000432149 701 ntBASIC3.97□□□□□ -1.77
CDH11P55287 PPIAP17-201ENST00000438507 471 ntBASIC3.97□□□□□ -1.77
CDH11P55287 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 AL353748.1-201ENST00000440753 474 ntBASIC3.97□□□□□ -1.77
CDH11P55287 RPL7P59-201ENST00000447700 943 ntBASIC3.97□□□□□ -1.77
CDH11P55287 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
CDH11P55287 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH11P55287 RPS26P3-201ENST00000470205 348 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC090543.2-201ENST00000483963 348 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC004057.1-201ENST00000485827 348 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 AC048346.1-201ENST00000510247 144 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC093755.1-201ENST00000512950 1023 ntBASIC3.97□□□□□ -1.77
CDH11P55287 RNU5A-4P-201ENST00000516588 111 ntBASIC3.97□□□□□ -1.77
CDH11P55287 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH11P55287 UBTFL10-201ENST00000528532 562 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AP001317.1-201ENST00000531194 960 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH11P55287 AC084783.1-201ENST00000565846 910 ntBASIC3.97□□□□□ -1.77
CDH11P55287 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH11P55287 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH11P55287 AC008687.2-201ENST00000597865 520 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC025946.2-201ENST00000603398 234 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AP003392.5-201ENST00000607857 415 ntBASIC3.97□□□□□ -1.77
CDH11P55287 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 AC019278.1-201ENST00000623516 479 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC124312.6-202ENST00000623624 418 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AP003485.2-201ENST00000623636 610 ntBASIC3.97□□□□□ -1.77
CDH11P55287 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH11P55287 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 AL118496.1-201ENST00000440201 1812 ntBASIC3.97□□□□□ -1.77
CDH11P55287 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH11P55287 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH11P55287 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH11P55287 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH11P55287 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CDH11P55287 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CDH11P55287 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH11P55287 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH11P55287 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH11P55287 RAD17P1-201ENST00000418130 2042 ntBASIC3.96□□□□□ -1.78
CDH11P55287 RNU6-1214P-201ENST00000363650 109 ntBASIC3.96□□□□□ -1.78
CDH11P55287 Y_RNA.192-201ENST00000363977 102 ntBASIC3.96□□□□□ -1.78
CDH11P55287 SNORA70.2-201ENST00000364506 135 ntBASIC3.96□□□□□ -1.78
CDH11P55287 RNU4-25P-201ENST00000410569 230 ntBASIC3.96□□□□□ -1.78
CDH11P55287 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH11P55287 AC011998.1-201ENST00000433403 117 ntBASIC3.96□□□□□ -1.78
CDH11P55287 ELOCP18-201ENST00000434209 337 ntBASIC3.96□□□□□ -1.78
CDH11P55287 CEACAMP1-201ENST00000434624 1035 ntBASIC3.96□□□□□ -1.78
CDH11P55287 FGF7P5-201ENST00000441829 291 ntBASIC3.96□□□□□ -1.78
CDH11P55287 RPL23AP76-201ENST00000441860 458 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH11P55287 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 AC096992.1-201ENST00000459808 709 ntBASIC3.96□□□□□ -1.78
CDH11P55287 RPS27AP17-201ENST00000463344 455 ntBASIC3.96□□□□□ -1.78
CDH11P55287 MTND2P14-201ENST00000482139 351 ntBASIC3.96□□□□□ -1.78
CDH11P55287 VPS26AP1-201ENST00000483197 979 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC011352.3-201ENST00000505162 593 ntBASIC3.96□□□□□ -1.78
CDH11P55287 MTCYBP16-201ENST00000509187 1129 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC109471.1-201ENST00000511631 612 ntBASIC3.96□□□□□ -1.78
CDH11P55287 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 AC119751.5-201ENST00000514077 770 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH11P55287 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH11P55287 MTND2P38-201ENST00000522536 667 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH11P55287 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH11P55287 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH11P55287 NBEAP1-201ENST00000554452 979 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH11P55287 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH11P55287 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CDH11P55287 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH11P55287 AP003973.1-201ENST00000604639 691 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AL450489.1-201ENST00000612071 468 ntBASIC3.96□□□□□ -1.78
CDH11P55287 AC105227.2-201ENST00000615075 605 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms