Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU2-65P-201ENST00000410162 185 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC004022.2-201ENST00000413824 193 ntBASIC4.21□□□□□ -1.74
VCPP55072 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.21□□□□□ -1.74
VCPP55072 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.21□□□□□ -1.74
VCPP55072 AL358472.1-201ENST00000431295 329 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC074367.1-201ENST00000438685 1125 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.21□□□□□ -1.74
VCPP55072 VN1R25P-201ENST00000443385 738 ntBASIC4.21□□□□□ -1.74
VCPP55072 VN1R40P-201ENST00000455196 941 ntBASIC4.21□□□□□ -1.74
VCPP55072 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.21□□□□□ -1.74
VCPP55072 RN7SL293P-201ENST00000481765 281 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC107398.1-201ENST00000486904 505 ntBASIC4.21□□□□□ -1.74
VCPP55072 RPL29P14-201ENST00000495837 428 ntBASIC4.21□□□□□ -1.74
VCPP55072 HMGB1P21-201ENST00000502313 581 ntBASIC4.21□□□□□ -1.74
VCPP55072 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
VCPP55072 MTND3P24-201ENST00000506306 329 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
VCPP55072 RNU6-352P-201ENST00000516908 107 ntBASIC4.21□□□□□ -1.74
VCPP55072 HAUS1P3-201ENST00000523909 662 ntBASIC4.21□□□□□ -1.74
VCPP55072 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.21□□□□□ -1.74
VCPP55072 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.21□□□□□ -1.74
VCPP55072 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.21□□□□□ -1.74
VCPP55072 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
VCPP55072 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.21□□□□□ -1.74
VCPP55072 AC022968.1-201ENST00000567372 442 ntBASIC4.21□□□□□ -1.74
VCPP55072 CBX3P2-202ENST00000583365 535 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC020914.4-201ENST00000597690 277 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC069304.3-201ENST00000603938 1084 ntBASIC4.21□□□□□ -1.74
VCPP55072 ELOCP35-201ENST00000604289 336 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC115621.1-201ENST00000604653 858 ntBASIC4.21□□□□□ -1.74
VCPP55072 AP000255.1-201ENST00000610276 676 ntBASIC4.21□□□□□ -1.74
VCPP55072 MIR6868-201ENST00000611215 58 ntBASIC4.21□□□□□ -1.74
VCPP55072 MIR1264-201ENST00000616374 69 ntBASIC4.21□□□□□ -1.74
VCPP55072 AP004607.9-201ENST00000618202 316 ntBASIC4.21□□□□□ -1.74
VCPP55072 AP006248.3-201ENST00000623580 594 ntBASIC4.21□□□□□ -1.74
VCPP55072 AC090617.9-201ENST00000623751 147 ntBASIC4.21□□□□□ -1.74
VCPP55072 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.21□□□□□ -1.74
VCPP55072 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.21□□□□□ -1.74
VCPP55072 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.2□□□□□ -1.74
VCPP55072 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VCPP55072 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VCPP55072 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.2□□□□□ -1.74
VCPP55072 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.2□□□□□ -1.74
VCPP55072 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.2□□□□□ -1.74
VCPP55072 RPL34P26-201ENST00000445636 354 ntBASIC4.2□□□□□ -1.74
VCPP55072 RPS11P1-201ENST00000451072 473 ntBASIC4.2□□□□□ -1.74
VCPP55072 RPL7P1-201ENST00000468161 747 ntBASIC4.2□□□□□ -1.74
VCPP55072 RPL23AP71-201ENST00000470966 469 ntBASIC4.2□□□□□ -1.74
VCPP55072 AC087385.1-201ENST00000475062 312 ntBASIC4.2□□□□□ -1.74
VCPP55072 RN7SL323P-201ENST00000494712 295 ntBASIC4.2□□□□□ -1.74
VCPP55072 RN7SKP83-201ENST00000516512 178 ntBASIC4.2□□□□□ -1.74
VCPP55072 RNA5SP309-201ENST00000516670 106 ntBASIC4.2□□□□□ -1.74
VCPP55072 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.2□□□□□ -1.74
VCPP55072 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.2□□□□□ -1.74
VCPP55072 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.2□□□□□ -1.74
VCPP55072 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.2□□□□□ -1.74
VCPP55072 MIR3922-201ENST00000585192 84 ntBASIC4.2□□□□□ -1.74
VCPP55072 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.2□□□□□ -1.74
VCPP55072 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.2□□□□□ -1.74
VCPP55072 AL031985.2-201ENST00000600955 480 ntBASIC4.2□□□□□ -1.74
VCPP55072 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.2□□□□□ -1.74
VCPP55072 SUMO2P14-201ENST00000604488 293 ntBASIC4.2□□□□□ -1.74
VCPP55072 U3.45-201ENST00000607547 219 ntBASIC4.2□□□□□ -1.74
VCPP55072 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VCPP55072 AC004943.3-201ENST00000624116 600 ntBASIC4.2□□□□□ -1.74
VCPP55072 MIR3651-201ENST00000630427 90 ntBASIC4.2□□□□□ -1.74
VCPP55072 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VCPP55072 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.2□□□□□ -1.74
VCPP55072 FAM35DP-201ENST00000323387 2712 ntBASIC4.2□□□□□ -1.74
VCPP55072 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VCPP55072 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.2□□□□□ -1.74
VCPP55072 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VCPP55072 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VCPP55072 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.19□□□□□ -1.74
VCPP55072 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.19□□□□□ -1.74
VCPP55072 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VCPP55072 SNORA48.2-201ENST00000390926 124 ntBASIC4.19□□□□□ -1.74
VCPP55072 TAF9BP2-201ENST00000400856 499 ntBASIC4.19□□□□□ -1.74
VCPP55072 AL122016.1-201ENST00000403365 367 ntBASIC4.19□□□□□ -1.74
VCPP55072 RNU4-74P-201ENST00000411280 161 ntBASIC4.19□□□□□ -1.74
VCPP55072 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VCPP55072 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.19□□□□□ -1.74
VCPP55072 AC092832.1-201ENST00000422934 400 ntBASIC4.19□□□□□ -1.74
VCPP55072 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.19□□□□□ -1.74
VCPP55072 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.19□□□□□ -1.74
VCPP55072 AC105402.2-201ENST00000438503 358 ntBASIC4.19□□□□□ -1.74
VCPP55072 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.19□□□□□ -1.74
VCPP55072 BX510359.1-201ENST00000456973 237 ntBASIC4.19□□□□□ -1.74
VCPP55072 AP001486.1-201ENST00000463339 476 ntBASIC4.19□□□□□ -1.74
VCPP55072 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
VCPP55072 AC106872.2-201ENST00000494303 480 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms