Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP98P52948 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP98P52948 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NUP98P52948 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NUP98P52948 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 RN7SKP220-201ENST00000410611 288 ntBASIC3.88□□□□□ -1.79
NUP98P52948 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP98P52948 RANP4-201ENST00000413361 655 ntBASIC3.88□□□□□ -1.79
NUP98P52948 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.88□□□□□ -1.79
NUP98P52948 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP98P52948 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP98P52948 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
NUP98P52948 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP98P52948 RNA5SP217-201ENST00000515959 91 ntBASIC3.88□□□□□ -1.79
NUP98P52948 AC010306.1-201ENST00000523223 1117 ntBASIC3.88□□□□□ -1.79
NUP98P52948 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 AC096644.4-201ENST00000563417 2912 ntBASIC3.88□□□□□ -1.79
NUP98P52948 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP98P52948 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 CDC27P2-201ENST00000425026 1922 ntBASIC3.87□□□□□ -1.79
NUP98P52948 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP98P52948 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 AL591623.2-201ENST00000449978 222 ntBASIC3.87□□□□□ -1.79
NUP98P52948 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP98P52948 AC117440.1-201ENST00000474107 571 ntBASIC3.87□□□□□ -1.79
NUP98P52948 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.87□□□□□ -1.79
NUP98P52948 AC009812.2-201ENST00000517657 457 ntBASIC3.87□□□□□ -1.79
NUP98P52948 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP98P52948 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NUP98P52948 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP98P52948 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.87□□□□□ -1.79
NUP98P52948 PRELID3BP8-201ENST00000604148 295 ntBASIC3.87□□□□□ -1.79
NUP98P52948 AC009948.4-201ENST00000604692 675 ntBASIC3.87□□□□□ -1.79
NUP98P52948 MIR7106-201ENST00000612419 65 ntBASIC3.87□□□□□ -1.79
NUP98P52948 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.87□□□□□ -1.79
NUP98P52948 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NUP98P52948 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NUP98P52948 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.87□□□□□ -1.79
NUP98P52948 RNU6-7-201ENST00000364784 107 ntBASIC3.86□□□□□ -1.79
NUP98P52948 RNU6-8-201ENST00000365467 107 ntBASIC3.86□□□□□ -1.79
NUP98P52948 UBE2V1P2-201ENST00000397758 440 ntBASIC3.86□□□□□ -1.79
NUP98P52948 AL135938.1-201ENST00000443141 297 ntBASIC3.86□□□□□ -1.79
NUP98P52948 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.86□□□□□ -1.79
NUP98P52948 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.86□□□□□ -1.79
NUP98P52948 AC006023.1-201ENST00000603944 259 ntBASIC3.86□□□□□ -1.79
NUP98P52948 AL365400.2-201ENST00000605604 902 ntBASIC3.86□□□□□ -1.79
NUP98P52948 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP98P52948 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.86□□□□□ -1.79
NUP98P52948 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NUP98P52948 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NUP98P52948 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP98P52948 AP003122.5-201ENST00000527668 3766 ntBASIC3.86□□□□□ -1.79
NUP98P52948 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP98P52948 AC007390.2-201ENST00000606229 3803 ntBASIC3.86□□□□□ -1.79
NUP98P52948 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NUP98P52948 OR1S2-201ENST00000302592 978 ntBASIC3.86□□□□□ -1.79
NUP98P52948 MIR22-201ENST00000362190 85 ntBASIC3.86□□□□□ -1.79
NUP98P52948 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP98P52948 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NUP98P52948 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NUP98P52948 GLRXP1-201ENST00000423261 334 ntBASIC3.86□□□□□ -1.79
NUP98P52948 AC140076.1-201ENST00000449897 361 ntBASIC3.86□□□□□ -1.79
NUP98P52948 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.86□□□□□ -1.79
NUP98P52948 AC008507.1-201ENST00000587506 734 ntBASIC3.86□□□□□ -1.79
NUP98P52948 AC074140.1-201ENST00000621617 208 ntBASIC3.86□□□□□ -1.79
NUP98P52948 AC099506.2-201ENST00000623074 221 ntBASIC3.86□□□□□ -1.79
NUP98P52948 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP98P52948 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.86□□□□□ -1.79
NUP98P52948 AC132825.8-201ENST00000640783 297 ntBASIC3.86□□□□□ -1.79
NUP98P52948 TTC39DP-201ENST00000416781 1688 ntBASIC3.86□□□□□ -1.79
NUP98P52948 RIOK3P1-201ENST00000418778 1528 ntBASIC3.86□□□□□ -1.79
NUP98P52948 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUP98P52948 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUP98P52948 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP98P52948 AC090971.4-201ENST00000560291 1800 ntBASIC3.85□□□□□ -1.79
NUP98P52948 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NUP98P52948 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUP98P52948 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP98P52948 AC069540.1-201ENST00000446320 988 ntBASIC3.85□□□□□ -1.79
NUP98P52948 AC239809.1-201ENST00000450470 217 ntBASIC3.85□□□□□ -1.79
NUP98P52948 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP98P52948 HMGB1P5-202ENST00000451497 985 ntBASIC3.85□□□□□ -1.79
NUP98P52948 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.85□□□□□ -1.79
NUP98P52948 TRBV8-2-201ENST00000475637 270 ntBASIC3.85□□□□□ -1.79
NUP98P52948 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP98P52948 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP98P52948 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP98P52948 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.85□□□□□ -1.79
NUP98P52948 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.85□□□□□ -1.79
NUP98P52948 AL451049.1-201ENST00000608672 497 ntBASIC3.85□□□□□ -1.79
NUP98P52948 AC005858.4-201ENST00000623191 700 ntBASIC3.85□□□□□ -1.79
NUP98P52948 AC026523.2-201ENST00000625039 7739 ntBASIC3.85□□□□□ -1.79
NUP98P52948 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms